Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 RPL7P39-201ENST00000481157 744 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 SEPT10P1-201ENST00000517342 1162 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HOXC13P31276 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 WBP1LP8-201ENST00000617401 327 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 AP001002.2-201ENST00000625137 386 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC13P31276 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC13P31276 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC13P31276 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXC13P31276 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 AC092079.1-201ENST00000558620 1985 ntBASIC5.67□□□□□ -1.5
HOXC13P31276 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC13P31276 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
HOXC13P31276 AL359715.3-201ENST00000569267 2123 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
HOXC13P31276 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 HSPD1P11-201ENST00000508643 1702 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 RNU6-618P-201ENST00000363518 112 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 RN7SKP224-201ENST00000364140 325 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 RNU1-43P-201ENST00000365052 165 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 OR4K12P-201ENST00000406538 961 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC13P31276 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC13P31276 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.66□□□□□ -1.5
HOXC13P31276 AL590609.2-201ENST00000421430 368 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 NDUFB4P8-201ENST00000435351 367 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 RSL24D1P2-201ENST00000445584 366 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC13P31276 AL157884.3-201ENST00000448273 1184 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 NPM1P28-201ENST00000492269 840 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.66□□□□□ -1.5
HOXC13P31276 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 AC078878.1-201ENST00000539832 958 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 BLZF2P-201ENST00000553776 1130 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 AC127381.1-201ENST00000555979 939 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC13P31276 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 AL445528.2-201ENST00000620582 470 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 AC145207.9-201ENST00000623802 325 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC13P31276 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 AC079097.1-201ENST00000512187 1399 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 AL445437.1-201ENST00000623157 3087 ntBASIC5.66□□□□□ -1.5
HOXC13P31276 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC13P31276 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 AC007938.2-201ENST00000604666 2634 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC13P31276 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
HOXC13P31276 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HOXC13P31276 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC13P31276 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HOXC13P31276 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HOXC13P31276 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HOXC13P31276 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HOXC13P31276 AL607077.1-201ENST00000401718 499 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 FABP12P1-201ENST00000401911 322 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AL645733.1-201ENST00000402250 217 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AL034374.1-201ENST00000406329 351 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AL133325.1-201ENST00000421090 382 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AC007064.3-201ENST00000422608 359 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 NPM1P26-201ENST00000426339 738 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AC138761.5-201ENST00000433967 325 ntBASIC5.65□□□□□ -1.5
HOXC13P31276 AC073465.2-201ENST00000440938 498 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms