Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
RXRBP28702 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
RXRBP28702 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RXRBP28702 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RXRBP28702 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
RXRBP28702 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
RXRBP28702 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RXRBP28702 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.71□□□□□ -1.18
RXRBP28702 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.71□□□□□ -1.18
RXRBP28702 AL589993.1-201ENST00000407450 2524 ntBASIC7.71□□□□□ -1.18
RXRBP28702 AC011493.1-201ENST00000596753 1632 ntBASIC7.7□□□□□ -1.18
RXRBP28702 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RXRBP28702 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 PRNCR1-201ENST00000635449 12727 ntBASIC7.7□□□□□ -1.18
RXRBP28702 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RXRBP28702 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RXRBP28702 LINC01616-201ENST00000561816 2280 ntBASIC7.7□□□□□ -1.18
RXRBP28702 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 NLRP3P1-201ENST00000622303 1785 ntBASIC7.7□□□□□ -1.18
RXRBP28702 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RXRBP28702 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RXRBP28702 MIR433-201ENST00000384837 93 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 CHMP1B2P-201ENST00000399581 597 ntBASIC7.7□□□□□ -1.18
RXRBP28702 MIR541-201ENST00000401360 84 ntBASIC7.7□□□□□ -1.18
RXRBP28702 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.7□□□□□ -1.18
RXRBP28702 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC7.7□□□□□ -1.18
RXRBP28702 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.7□□□□□ -1.18
RXRBP28702 AC084290.1-201ENST00000434995 374 ntBASIC7.7□□□□□ -1.18
RXRBP28702 MTND2P21-201ENST00000436242 1042 ntBASIC7.7□□□□□ -1.18
RXRBP28702 FABP5P3-201ENST00000437960 408 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.7□□□□□ -1.18
RXRBP28702 AC234781.3-201ENST00000452540 973 ntBASIC7.7□□□□□ -1.18
RXRBP28702 PTGES3P5-201ENST00000455109 434 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AC092754.2-201ENST00000463506 460 ntBASIC7.7□□□□□ -1.18
RXRBP28702 SETP6-201ENST00000479329 568 ntBASIC7.7□□□□□ -1.18
RXRBP28702 RPL32P33-201ENST00000487023 394 ntBASIC7.7□□□□□ -1.18
RXRBP28702 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.7□□□□□ -1.18
RXRBP28702 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 MTND5P13-201ENST00000513046 1079 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.7□□□□□ -1.18
RXRBP28702 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.7□□□□□ -1.18
RXRBP28702 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.7□□□□□ -1.18
RXRBP28702 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 AGGF1P4-201ENST00000568249 801 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.7□□□□□ -1.18
RXRBP28702 AC125494.3-201ENST00000602759 455 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AP000811.1-201ENST00000603803 651 ntBASIC7.7□□□□□ -1.18
RXRBP28702 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 VN1R7P-201ENST00000619242 903 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AC079298.2-201ENST00000623885 459 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AC073530.2-201ENST00000623987 261 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RXRBP28702 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
RXRBP28702 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RXRBP28702 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RXRBP28702 ECM1P2-201ENST00000503354 1577 ntBASIC7.7□□□□□ -1.18
RXRBP28702 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.7□□□□□ -1.18
RXRBP28702 NEK2P4-201ENST00000425793 1329 ntBASIC7.7□□□□□ -1.18
RXRBP28702 AL512310.3-201ENST00000547023 1335 ntBASIC7.7□□□□□ -1.18
RXRBP28702 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RXRBP28702 AC092104.1-201ENST00000497346 1441 ntBASIC7.69□□□□□ -1.18
RXRBP28702 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 AC011815.2-201ENST00000618230 2021 ntBASIC7.69□□□□□ -1.18
RXRBP28702 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.69□□□□□ -1.18
RXRBP28702 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 AC019072.1-201ENST00000604535 1551 ntBASIC7.69□□□□□ -1.18
RXRBP28702 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 SNORA70.2-201ENST00000364506 135 ntBASIC7.69□□□□□ -1.18
RXRBP28702 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RXRBP28702 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 AL050335.1-201ENST00000396909 869 ntBASIC7.69□□□□□ -1.18
RXRBP28702 RPS3AP26-201ENST00000398259 784 ntBASIC7.69□□□□□ -1.18
RXRBP28702 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.69□□□□□ -1.18
RXRBP28702 TANK-206ENST00000406287 875 ntTSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 UBE2V1P9-201ENST00000414760 368 ntBASIC7.69□□□□□ -1.18
RXRBP28702 MTND4LP21-201ENST00000415303 295 ntBASIC7.69□□□□□ -1.18
RXRBP28702 ZNF736P2Y-201ENST00000416040 1279 ntBASIC7.69□□□□□ -1.18
RXRBP28702 AL449283.1-202ENST00000418249 604 ntBASIC7.69□□□□□ -1.18
RXRBP28702 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.69□□□□□ -1.18
RXRBP28702 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.69□□□□□ -1.18
RXRBP28702 AL360221.1-201ENST00000445989 335 ntBASIC7.69□□□□□ -1.18
RXRBP28702 MTND3P7-201ENST00000474435 343 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms