Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.47□□□□□ -1.21
VARSP26640 AC048346.1-201ENST00000510247 144 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 AC112206.3-201ENST00000514578 389 ntBASIC7.47□□□□□ -1.21
VARSP26640 SLC2A13P1-201ENST00000531560 322 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC018523.1-201ENST00000534211 512 ntBASIC7.47□□□□□ -1.21
VARSP26640 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.47□□□□□ -1.21
VARSP26640 AC023050.3-201ENST00000541142 333 ntBASIC7.47□□□□□ -1.21
VARSP26640 RPS7P1-201ENST00000571702 585 ntBASIC7.47□□□□□ -1.21
VARSP26640 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 MIR744-201ENST00000578242 98 ntBASIC7.47□□□□□ -1.21
VARSP26640 MIR4307-201ENST00000582802 84 ntBASIC7.47□□□□□ -1.21
VARSP26640 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.47□□□□□ -1.21
VARSP26640 HMGN1P30-201ENST00000589286 268 ntBASIC7.47□□□□□ -1.21
VARSP26640 OR7E19P-202ENST00000589942 844 ntBASIC7.47□□□□□ -1.21
VARSP26640 AL512605.2-201ENST00000592972 256 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.47□□□□□ -1.21
VARSP26640 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 DISC2.1-201ENST00000612827 205 ntBASIC7.47□□□□□ -1.21
VARSP26640 MIR6731-201ENST00000614863 72 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC008115.3-201ENST00000614874 549 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC087588.2-201ENST00000617667 426 ntBASIC7.47□□□□□ -1.21
VARSP26640 AL732618.1-201ENST00000623251 301 ntBASIC7.47□□□□□ -1.21
VARSP26640 AP006248.2-201ENST00000623309 592 ntBASIC7.47□□□□□ -1.21
VARSP26640 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
VARSP26640 MTND4P1-201ENST00000457501 1466 ntBASIC7.47□□□□□ -1.21
VARSP26640 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.46□□□□□ -1.21
VARSP26640 AC126773.4-201ENST00000612545 3043 ntBASIC7.46□□□□□ -1.21
VARSP26640 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
VARSP26640 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.46□□□□□ -1.21
VARSP26640 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.46□□□□□ -1.21
VARSP26640 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.46□□□□□ -1.21
VARSP26640 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
VARSP26640 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
VARSP26640 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
VARSP26640 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.46□□□□□ -1.21
VARSP26640 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
VARSP26640 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
VARSP26640 AP000766.1-201ENST00000561746 4140 ntBASIC7.46□□□□□ -1.21
VARSP26640 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
VARSP26640 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VARSP26640 MAPK10-323ENST00000641493 3207 ntBASIC7.46□□□□□ -1.22
VARSP26640 RNA5SP389-201ENST00000362610 115 ntBASIC7.46□□□□□ -1.22
VARSP26640 RNA5SP226-201ENST00000362653 115 ntBASIC7.46□□□□□ -1.22
VARSP26640 Y_RNA.159-201ENST00000363674 87 ntBASIC7.46□□□□□ -1.22
VARSP26640 RNU6-74P-201ENST00000384235 107 ntBASIC7.46□□□□□ -1.22
VARSP26640 AL450992.3-201ENST00000413192 568 ntBASIC7.46□□□□□ -1.22
VARSP26640 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VARSP26640 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.46□□□□□ -1.22
VARSP26640 RPL7P56-201ENST00000429441 717 ntBASIC7.46□□□□□ -1.22
VARSP26640 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.46□□□□□ -1.22
VARSP26640 AL606752.1-201ENST00000435442 666 ntBASIC7.46□□□□□ -1.22
VARSP26640 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.46□□□□□ -1.22
VARSP26640 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.46□□□□□ -1.22
VARSP26640 AC239860.1-201ENST00000444680 1270 ntBASIC7.46□□□□□ -1.22
VARSP26640 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.46□□□□□ -1.22
VARSP26640 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.46□□□□□ -1.22
VARSP26640 NDUFA5P7-201ENST00000452914 242 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC234771.3-201ENST00000454984 622 ntBASIC7.46□□□□□ -1.22
VARSP26640 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.46□□□□□ -1.22
VARSP26640 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
VARSP26640 SUMO2P17-201ENST00000504438 285 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC114801.1-201ENST00000512633 297 ntBASIC7.46□□□□□ -1.22
VARSP26640 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.46□□□□□ -1.22
VARSP26640 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.46□□□□□ -1.22
VARSP26640 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.46□□□□□ -1.22
VARSP26640 AC107953.1-201ENST00000522216 297 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.46□□□□□ -1.22
VARSP26640 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.46□□□□□ -1.22
VARSP26640 AP001994.1-201ENST00000527539 826 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC087241.2-201ENST00000535801 324 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.46□□□□□ -1.22
VARSP26640 NUTF2P2-201ENST00000551207 384 ntBASIC7.46□□□□□ -1.22
VARSP26640 DPPA3P2-201ENST00000553589 478 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.46□□□□□ -1.22
VARSP26640 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VARSP26640 AC090236.2-201ENST00000587933 1101 ntBASIC7.46□□□□□ -1.22
VARSP26640 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.46□□□□□ -1.22
VARSP26640 AL161734.1-201ENST00000609720 557 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC012488.1-201ENST00000611221 640 ntBASIC7.46□□□□□ -1.22
VARSP26640 AC104237.2-201ENST00000612456 443 ntBASIC7.46□□□□□ -1.22
VARSP26640 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.46□□□□□ -1.22
VARSP26640 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VARSP26640 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VARSP26640 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.46□□□□□ -1.22
VARSP26640 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms