Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MIR4737-201ENST00000583979 81 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC135178.6-201ENST00000605314 398 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC026422.1-201ENST00000623961 452 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
POLR2AP24928 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
POLR2AP24928 AC114774.1-201ENST00000507410 1770 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
POLR2AP24928 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
POLR2AP24928 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 AL031651.1-201ENST00000615357 1438 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.17□□□□□ -1.42
POLR2AP24928 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.17□□□□□ -1.42
POLR2AP24928 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 AC010401.2-201ENST00000575137 4934 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 RPL32P3-201ENST00000359025 275 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 AC005005.2-201ENST00000420779 380 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.17□□□□□ -1.42
POLR2AP24928 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 MTND4LP31-201ENST00000514859 294 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 AC034205.1-201ENST00000520621 638 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.17□□□□□ -1.42
POLR2AP24928 HNRNPRP2-201ENST00000528421 743 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.17□□□□□ -1.42
POLR2AP24928 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.17□□□□□ -1.42
POLR2AP24928 AC091057.2-201ENST00000602594 792 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 AC013444.2-201ENST00000603317 787 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 ABI1P1-201ENST00000603375 1120 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 AC006453.5-201ENST00000636451 619 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 AC013437.2-201ENST00000639587 677 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
POLR2AP24928 AL359715.3-201ENST00000569267 2123 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 AC003973.3-201ENST00000624863 2822 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
POLR2AP24928 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
POLR2AP24928 RNU1-74P-201ENST00000384108 171 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
POLR2AP24928 RN7SKP100-201ENST00000411258 284 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 HSPD1P12-201ENST00000429127 1069 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 Z99714.1-201ENST00000450463 807 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 UBTFL10-201ENST00000528532 562 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
POLR2AP24928 LRRC34P1-201ENST00000542742 915 ntBASIC6.17□□□□□ -1.42
POLR2AP24928 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.17□□□□□ -1.42
POLR2AP24928 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.17□□□□□ -1.42
POLR2AP24928 SDAD1P1-202ENST00000524156 2051 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
POLR2AP24928 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.16□□□□□ -1.42
POLR2AP24928 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 AC104162.1-201ENST00000430831 2382 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 OR9K1P-202ENST00000641111 3217 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
POLR2AP24928 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
POLR2AP24928 RNU2-50P-201ENST00000410494 143 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 CHIAP3-201ENST00000423668 1133 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 USP24P1-201ENST00000433802 779 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.16□□□□□ -1.42
POLR2AP24928 AP000563.1-201ENST00000490865 758 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 AC025674.1-201ENST00000507074 324 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.16□□□□□ -1.42
POLR2AP24928 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 OR4A43P-201ENST00000532938 908 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 AC068339.2-201ENST00000534395 618 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.16□□□□□ -1.42
POLR2AP24928 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.16□□□□□ -1.42
POLR2AP24928 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.16□□□□□ -1.42
POLR2AP24928 AC011453.2-201ENST00000603737 729 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.16□□□□□ -1.42
POLR2AP24928 AL356118.1-201ENST00000635272 1078 ntBASIC6.16□□□□□ -1.42
POLR2AP24928 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.16□□□□□ -1.42
POLR2AP24928 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.16□□□□□ -1.42
POLR2AP24928 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.16□□□□□ -1.42
POLR2AP24928 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
POLR2AP24928 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms