Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 NRBF2P3-201ENST00000432731 865 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGA1P17096 AC005154.2-201ENST00000438110 379 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGA1P17096 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGA1P17096 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGA1P17096 CBX1P2-201ENST00000453841 458 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGA1P17096 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGA1P17096 RN7SL205P-201ENST00000490174 284 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGA1P17096 AC092593.2-201ENST00000513866 913 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 RN7SKP276-201ENST00000516242 268 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGA1P17096 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGA1P17096 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGA1P17096 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGA1P17096 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGA1P17096 AC040958.1-201ENST00000561102 201 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 RN7SL52P-201ENST00000584271 284 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGA1P17096 AC008745.1-201ENST00000604064 271 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AC104687.2-201ENST00000604442 342 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AC010424.2-201ENST00000607594 443 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 RN7SL722P-201ENST00000617780 284 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 RN7SL565P-201ENST00000618246 284 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AL022401.1-201ENST00000619498 108 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 AP000346.3-201ENST00000622821 210 ntBASIC5.13□□□□□ -1.59
HMGA1P17096 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HMGA1P17096 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGA1P17096 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGA1P17096 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGA1P17096 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGA1P17096 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGA1P17096 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGA1P17096 U3.30-201ENST00000391308 210 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGA1P17096 RSU1P3-201ENST00000412878 835 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 AC092570.3-201ENST00000420113 693 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGA1P17096 AL359265.2-201ENST00000434367 631 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGA1P17096 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGA1P17096 AC006967.1-201ENST00000467608 589 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 AC096741.1-201ENST00000472250 846 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 NIFKP7-201ENST00000503365 834 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 SCARNA22-201ENST00000503991 125 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGA1P17096 AC026688.1-201ENST00000520639 1168 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGA1P17096 OR5AN2P-201ENST00000534535 896 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGA1P17096 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGA1P17096 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HMGA1P17096 AC116553.2-201ENST00000564203 463 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGA1P17096 AC019206.1-201ENST00000621938 425 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGA1P17096 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGA1P17096 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
HMGA1P17096 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMGA1P17096 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 NCLP2-201ENST00000416078 1462 ntBASIC5.12□□□□□ -1.59
HMGA1P17096 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMGA1P17096 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGA1P17096 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGA1P17096 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGA1P17096 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGA1P17096 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
HMGA1P17096 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 AP001029.2-203ENST00000589795 4910 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGA1P17096 SNORA73.1-201ENST00000363107 205 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGA1P17096 RPS16P5-201ENST00000406501 404 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 AC114755.2-201ENST00000413520 361 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 BX510359.2-201ENST00000417920 305 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGA1P17096 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 AC006463.2-201ENST00000473326 348 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 RN7SL459P-201ENST00000481078 302 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 AC093890.1-201ENST00000502554 540 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 ENPP7P11-201ENST00000505915 627 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGA1P17096 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGA1P17096 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.11□□□□□ -1.59
HMGA1P17096 AC100784.1-201ENST00000522790 310 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 SOX5P1-201ENST00000524155 1127 ntBASIC5.11□□□□□ -1.59
HMGA1P17096 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGA1P17096 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGA1P17096 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGA1P17096 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms