Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC136777.2-201ENST00000522979 358 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC6P09630 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC6P09630 UBE2FP2-201ENST00000566646 462 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 MIR4270-201ENST00000581799 70 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 RPAP2P1-201ENST00000603626 1168 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AC011458.1-201ENST00000604034 617 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AL162431.4-201ENST00000604674 411 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AC244107.2-201ENST00000611773 76 ntBASIC5.9□□□□□ -1.46
HOXC6P09630 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC6P09630 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC6P09630 SDAD1P1-202ENST00000524156 2051 ntBASIC5.9□□□□□ -1.47
HOXC6P09630 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC6P09630 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC6P09630 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
HOXC6P09630 AL359715.3-201ENST00000569267 2123 ntBASIC5.9□□□□□ -1.47
HOXC6P09630 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.9□□□□□ -1.47
HOXC6P09630 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC6P09630 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC6P09630 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC6P09630 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
HOXC6P09630 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 RN7SKP185-201ENST00000362813 326 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 RN7SKP153-201ENST00000365026 316 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 GAPDHP15-201ENST00000398586 975 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC6P09630 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 RN7SL481P-201ENST00000477764 299 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 RN7SL244P-201ENST00000493405 297 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 RAB9BP1-201ENST00000519581 626 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC6P09630 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 AL138960.1-201ENST00000613838 513 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 AC005618.4-201ENST00000625053 554 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 AL449283.1-201ENST00000602631 3403 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC6P09630 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HOXC6P09630 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC6P09630 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 AC024341.1-201ENST00000526444 1552 ntBASIC5.89□□□□□ -1.47
HOXC6P09630 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HOXC6P09630 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.88□□□□□ -1.47
HOXC6P09630 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HOXC6P09630 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 AL355834.1-201ENST00000556602 3965 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
HOXC6P09630 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 RN7SKP113-201ENST00000363891 295 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HOXC6P09630 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 Z97832.1-201ENST00000402490 328 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HOXC6P09630 AC019050.1-201ENST00000418508 492 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 AC092570.3-201ENST00000420113 693 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 AC091390.1-201ENST00000433904 331 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 AC099670.2-201ENST00000435130 321 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC6P09630 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC6P09630 GXYLT1P1-201ENST00000446657 490 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC6P09630 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC6P09630 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC6P09630 AC006427.1-201ENST00000514359 712 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC6P09630 SUMO2P19-201ENST00000518920 295 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms