Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 HMGN2P27-201ENST00000427352 270 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 RBMY2QP-201ENST00000429799 1147 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 BTF3P6-201ENST00000448054 499 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC000111.2-201ENST00000448200 210 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 RN7SL319P-201ENST00000480656 221 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 COX6B1P2-201ENST00000489624 230 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 OR2A3P-201ENST00000493774 953 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 OR5M14P-201ENST00000506803 618 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC147055.3-201ENST00000510547 851 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 RNA5SP392-201ENST00000516905 112 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC026688.1-201ENST00000520639 1168 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 HNRNPRP2-201ENST00000528421 743 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 LSM1P2-201ENST00000604911 322 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 EIF3FP1-201ENST00000613970 806 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AL356752.1-201ENST00000615844 593 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC009643.2-201ENST00000603543 1448 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 MRRFP1-201ENST00000435941 1675 ntBASIC5.02□□□□□ -1.61
HLA-DQB2P05538 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DQB2P05538 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 Z97832.1-201ENST00000402490 328 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AL357515.1-201ENST00000402967 542 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AC093414.1-201ENST00000434712 514 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 RPL7P11-201ENST00000437586 658 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 snoU13.20-201ENST00000459180 104 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AC140172.1-201ENST00000502928 141 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AP006245.2-201ENST00000522004 300 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 TVP23CP2-201ENST00000571473 623 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AC037198.3-201ENST00000616754 526 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AL442128.2-201ENST00000620246 1824 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DQB2P05538 AC026523.2-201ENST00000625039 7739 ntBASIC5.01□□□□□ -1.61
HLA-DQB2P05538 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 Z95331.1-201ENST00000623075 23112 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 RN7SKP104-201ENST00000362605 328 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DQB2P05538 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AL021331.1-201ENST00000402817 582 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 AP002530.1-201ENST00000405705 684 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 TBCAP2-201ENST00000416175 326 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 PSMD10P3-201ENST00000437000 448 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AL157385.1-201ENST00000446973 268 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 TRY2P-201ENST00000448860 689 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 NPM1P19-201ENST00000450070 712 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 AC026348.1-201ENST00000462549 1053 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 RN7SL97P-201ENST00000486780 299 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQB2P05538 AC008638.1-201ENST00000506035 866 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQB2P05538 ENPP7P9-201ENST00000514456 627 ntBASIC5□□□□□ -1.61
HLA-DQB2P05538 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms