Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 OR9G4-201ENST00000302957 984 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDGFBP01127 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
PDGFBP01127 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDGFBP01127 RNA5SP105-201ENST00000391123 113 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 HMGB3P7-201ENST00000400214 611 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 HSPA8P15-201ENST00000401676 786 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 TMA16P2-201ENST00000413187 601 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 AC022336.1-201ENST00000475510 337 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 AC079080.1-201ENST00000479841 822 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PDGFBP01127 RN7SKP253-201ENST00000516424 309 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.37□□□□□ -1.55
PDGFBP01127 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PDGFBP01127 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 BGLT3-201ENST00000564523 994 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFBP01127 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 AC011453.2-201ENST00000603737 729 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 MEMO1P5-201ENST00000604810 406 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 AL359757.1-201ENST00000623176 255 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PDGFBP01127 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PDGFBP01127 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.37□□□□□ -1.55
PDGFBP01127 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFBP01127 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFBP01127 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFBP01127 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFBP01127 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.36□□□□□ -1.55
PDGFBP01127 RNA5SP191-201ENST00000362585 102 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 RNA5SP428-201ENST00000365129 132 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 RNA5SP251-201ENST00000410614 137 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFBP01127 AC007568.1-201ENST00000422912 471 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFBP01127 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFBP01127 AC004975.1-201ENST00000428733 208 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFBP01127 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFBP01127 NUTF2P7-201ENST00000453086 375 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 SNRPCP3-201ENST00000474888 476 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AC058823.1-201ENST00000485315 474 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AC109464.1-201ENST00000511091 819 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 TOMM22P4-201ENST00000511318 336 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 RN7SKP21-201ENST00000516503 220 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFBP01127 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFBP01127 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFBP01127 AC091042.1-201ENST00000579213 173 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFBP01127 AC079791.1-201ENST00000605356 973 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AC117490.2-201ENST00000610042 594 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 AC004836.1-201ENST00000623032 634 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 AC068724.3-201ENST00000625906 87 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFBP01127 AC135068.12-201ENST00000637370 931 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 UGT2B24P-201ENST00000514441 1597 ntBASIC5.36□□□□□ -1.55
PDGFBP01127 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PDGFBP01127 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFBP01127 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFBP01127 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
PDGFBP01127 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFBP01127 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDGFBP01127 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 SDAD1P1-202ENST00000524156 2051 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PDGFBP01127 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 AC092747.4-201ENST00000620519 1861 ntBASIC5.35□□□□□ -1.55
PDGFBP01127 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFBP01127 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms