Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU6-584P-201ENST00000410350 95 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 DPPA2P3-201ENST00000411853 655 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AL354766.1-201ENST00000423396 542 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 AC073465.2-201ENST00000440938 498 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.47□□□□□ -1.53
SMAD6O43541 RN7SL172P-201ENST00000460535 303 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 RN7SL727P-201ENST00000482164 296 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC058823.1-201ENST00000485315 474 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 RN7SL30P-201ENST00000488416 306 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC072052.1-201ENST00000496556 306 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC008638.1-201ENST00000506035 866 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 HIGD1AP14-201ENST00000507617 282 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 AC091912.1-201ENST00000511351 248 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.47□□□□□ -1.53
SMAD6O43541 AC117525.1-201ENST00000515228 503 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 RNA5SP373-201ENST00000517271 95 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 CDC42P3-201ENST00000518493 633 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 OR8Q1P-201ENST00000526467 655 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.47□□□□□ -1.53
SMAD6O43541 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 AC006116.7-201ENST00000590141 756 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 OR4H6P-202ENST00000603819 340 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC092944.2-201ENST00000605443 889 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 SDR42E1P1-201ENST00000611327 477 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.47□□□□□ -1.53
SMAD6O43541 MIR6719-201ENST00000622428 87 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AL138955.1-201ENST00000622881 1040 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.47□□□□□ -1.53
SMAD6O43541 AL356118.1-201ENST00000635272 1078 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 CYP4F35P-202ENST00000636121 390 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.47□□□□□ -1.53
SMAD6O43541 AP002512.4-202ENST00000641599 4530 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SMAD6O43541 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC092451.3-201ENST00000625067 1343 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 AC003973.3-201ENST00000624863 2822 ntBASIC5.47□□□□□ -1.53
SMAD6O43541 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMAD6O43541 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
SMAD6O43541 OR55B1P-203ENST00000641518 2602 ntBASIC5.46□□□□□ -1.53
SMAD6O43541 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.46□□□□□ -1.53
SMAD6O43541 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.46□□□□□ -1.53
SMAD6O43541 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SMAD6O43541 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMAD6O43541 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SMAD6O43541 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMAD6O43541 AC005294.1-201ENST00000355509 281 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SMAD6O43541 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SMAD6O43541 RNU1-149P-201ENST00000390870 161 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 DBIP1-201ENST00000401435 260 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 VPS26BP1-201ENST00000417155 755 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 HMGB3P5-201ENST00000428894 612 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 RPL12P17-201ENST00000432393 498 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC099670.2-201ENST00000435130 321 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 NDUFB4P8-201ENST00000435351 367 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 MAPRE1P3-201ENST00000435438 796 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 CNOT7P2-201ENST00000441051 832 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.46□□□□□ -1.54
SMAD6O43541 GAPDHP25-201ENST00000447061 1001 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC083899.1-201ENST00000454465 3819 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 MORF4L2P1-201ENST00000503761 858 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC096571.1-202ENST00000506634 735 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 SCARNA20.4-201ENST00000516969 131 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 IGLV2-28-201ENST00000520681 304 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 AC004825.1-201ENST00000555068 586 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 AC106785.3-201ENST00000564064 847 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 AC133794.1-201ENST00000602731 914 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMAD6O43541 AC093783.1-201ENST00000612976 329 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.46□□□□□ -1.54
SMAD6O43541 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SMAD6O43541 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms