Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC010435.1-201ENST00000623353 1177 ntBASIC6□□□□□ -1.45
FOXN3O00409 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6□□□□□ -1.45
FOXN3O00409 AC132825.7-201ENST00000638744 335 ntBASIC6□□□□□ -1.45
FOXN3O00409 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6□□□□□ -1.45
FOXN3O00409 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXN3O00409 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6□□□□□ -1.45
FOXN3O00409 ZNF733P-202ENST00000444809 1573 ntBASIC6□□□□□ -1.45
FOXN3O00409 AC091305.2-201ENST00000624049 1576 ntBASIC6□□□□□ -1.45
FOXN3O00409 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
FOXN3O00409 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FOXN3O00409 AC144833.1-201ENST00000567953 4089 ntBASIC6□□□□□ -1.45
FOXN3O00409 AC083899.1-201ENST00000454465 3819 ntBASIC6□□□□□ -1.45
FOXN3O00409 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXN3O00409 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6□□□□□ -1.45
FOXN3O00409 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXN3O00409 AC106872.5-201ENST00000508856 1416 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXN3O00409 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
FOXN3O00409 HSPD1P11-201ENST00000508643 1702 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXN3O00409 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXN3O00409 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXN3O00409 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXN3O00409 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXN3O00409 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXN3O00409 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
FOXN3O00409 RPS3AP2-201ENST00000407190 754 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 RPSAP35-201ENST00000413753 818 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXN3O00409 AC007161.1-204ENST00000423039 460 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 MTCYBP32-201ENST00000427945 1084 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXN3O00409 NDUFB4P8-201ENST00000435351 367 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 RPL7P33-201ENST00000444159 742 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AC023271.1-201ENST00000445936 1090 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXN3O00409 EIF4A2P5-201ENST00000529914 499 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.99□□□□□ -1.45
FOXN3O00409 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 AC124283.4-201ENST00000581815 456 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXN3O00409 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXN3O00409 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXN3O00409 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXN3O00409 MIR6133-201ENST00000617057 108 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AC093875.1-201ENST00000623688 504 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AC006927.2-201ENST00000639256 389 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 AC119674.1-212ENST00000641155 993 ntBASIC5.99□□□□□ -1.45
FOXN3O00409 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FOXN3O00409 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXN3O00409 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
FOXN3O00409 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.99□□□□□ -1.45
FOXN3O00409 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.99□□□□□ -1.45
FOXN3O00409 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.99□□□□□ -1.45
FOXN3O00409 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 AC007382.1-201ENST00000624376 2618 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 BCORP1-203ENST00000513194 5093 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
FOXN3O00409 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.98□□□□□ -1.45
FOXN3O00409 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FOXN3O00409 AC104297.1-201ENST00000393779 870 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 EI24P3-201ENST00000399046 1062 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AL133482.1-201ENST00000415988 498 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 MTCO3P4-201ENST00000419236 787 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 GNG5P5-201ENST00000420444 220 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 TCEA1P2-201ENST00000420496 906 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 AL662874.1-201ENST00000426065 230 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.98□□□□□ -1.45
FOXN3O00409 MTND2P40-201ENST00000436718 841 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 AC005297.1-201ENST00000444765 862 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.98□□□□□ -1.45
FOXN3O00409 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.98□□□□□ -1.45
FOXN3O00409 RN7SL72P-201ENST00000460697 269 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC107015.1-201ENST00000466902 747 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 NDUFA5P5-201ENST00000468361 342 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 RPL12P24-201ENST00000474907 486 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 HMGB1P38-201ENST00000490557 577 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms