Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RPL17P36-201ENST00000420302 549 ntBASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 RFESDP1-201ENST00000422350 461 ntBASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 THAP12P8-201ENST00000447914 2115 ntBASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 AC010547.7-201ENST00000570323 333 ntBASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 MTATP6P25-201ENST00000574491 261 ntBASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 AL109618.2-201ENST00000605527 211 ntBASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC9.78□□□□□ -0.84
SHROOM4Q9ULL8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SHROOM4Q9ULL8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SHROOM4Q9ULL8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SHROOM4Q9ULL8 ICE2P1-201ENST00000512800 1849 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 RNU6-316P-201ENST00000391027 107 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 ZNF736P10Y-201ENST00000403990 1110 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 TAAR4P-201ENST00000454843 1039 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 HMGN2P25-201ENST00000486956 268 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 RN7SKP67-201ENST00000515905 235 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 BNIP3P22-201ENST00000593399 556 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AC010857.1-201ENST00000606398 594 ntBASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SHROOM4Q9ULL8 AP000547.3-204ENST00000588548 2523 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC009951.1-201ENST00000623674 2614 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 RNA5-8SP7-201ENST00000363443 155 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 SNORA57.1-201ENST00000391227 145 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC240504.1-201ENST00000395709 845 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC017078.1-201ENST00000416146 368 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 RNU6-775P-201ENST00000459318 96 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 RPL7P41-201ENST00000485823 957 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 SLC25A15P5-201ENST00000508033 253 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC111000.3-201ENST00000508057 576 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 MIR1254-2-201ENST00000579553 63 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AL139124.1-201ENST00000609123 421 ntBASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
SHROOM4Q9ULL8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 AC020656.2-201ENST00000613291 5309 ntBASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 HMGB3P7-201ENST00000400214 611 ntBASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 KCTD10P1-201ENST00000434203 625 ntBASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 AC112498.1-201ENST00000444401 332 ntBASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 CCNHP1-201ENST00000513311 678 ntBASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 TRAV11-201ENST00000539512 339 ntBASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SHROOM4Q9ULL8 AL360270.2-201ENST00000562952 5985 ntBASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 RN7SKP114-201ENST00000410327 279 ntBASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 BX510359.2-201ENST00000417920 305 ntBASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 AC009480.2-201ENST00000422916 432 ntBASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 AC234779.1-201ENST00000425910 285 ntBASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 ATP5A1P7-201ENST00000453978 1279 ntBASIC9.74□□□□□ -0.85
SHROOM4Q9ULL8 RPL7P40-201ENST00000481703 745 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms