Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 MTHFD2P5-201ENST00000320415 844 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 RNU4-4P-201ENST00000364588 130 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 RNA5SP90-201ENST00000364801 99 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC007618.1-201ENST00000366455 732 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 OR1L6-202ENST00000373684 1044 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AL589647.1-201ENST00000402485 466 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 NUDT19P3-201ENST00000404698 555 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AL590762.4-201ENST00000425885 253 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 HSPD1P12-201ENST00000429127 1069 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC092647.3-201ENST00000443044 633 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC245028.2-201ENST00000458673 253 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 MYL12BP2-201ENST00000503948 512 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC110775.1-201ENST00000513721 462 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC092490.3-201ENST00000545370 572 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 LSM3P2-201ENST00000551246 273 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 MTCYBP13-201ENST00000578634 1093 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 PRPF19P1-201ENST00000584766 898 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 BNIP3P32-201ENST00000600015 554 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AL161912.3-201ENST00000605404 628 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC024940.4-201ENST00000605507 246 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AL122125.1-201ENST00000616999 600 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC009950.2-201ENST00000636548 183 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC135068.12-201ENST00000637370 931 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 AC079298.1-201ENST00000625026 1619 ntBASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AC131971.1-201ENST00000332881 1482 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 OR8V1P-201ENST00000395193 873 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 MIR1182-201ENST00000408363 97 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AC017019.1-201ENST00000426129 261 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 RPL19P16-201ENST00000433839 588 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 CLUHP1-201ENST00000435012 1190 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 RPS29P10-201ENST00000439197 166 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 PRPF38AP1-201ENST00000451976 933 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AC093827.1-201ENST00000480094 861 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 RN7SKP147-201ENST00000517154 244 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AC013701.1-201ENST00000522657 465 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AP002373.2-201ENST00000541631 1060 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AC068993.1-201ENST00000546724 589 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AC040958.1-201ENST00000561102 201 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 MIR4646-201ENST00000580775 63 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 AL031595.2-201ENST00000624215 19071 ntBASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CLIP2Q9UDT6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 TRIM51GP-201ENST00000534741 1350 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AL645733.1-201ENST00000402250 217 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 RN7SKP125-201ENST00000410481 302 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 COX5BP7-201ENST00000414780 274 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AC016772.1-201ENST00000444170 1261 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AC021660.1-201ENST00000465006 554 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AC023424.1-201ENST00000496058 459 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AC004980.4-201ENST00000513375 203 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms