Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SKP184-201ENST00000362348 333 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RNA5SP273-201ENST00000362484 113 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RNA5SP477-201ENST00000362639 119 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RNU6-670P-201ENST00000364312 104 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC013442.1-201ENST00000397347 228 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 OR7E101P-201ENST00000400428 513 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MIR1203-201ENST00000408812 85 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 EEF1A1P29-201ENST00000416082 1096 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MARK2P12-201ENST00000420129 585 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AL035660.1-201ENST00000422041 222 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 NPM1P26-201ENST00000426339 738 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RPL7L1P1-201ENST00000448259 785 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 ACA64.1-201ENST00000459171 127 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RPSAP39-201ENST00000467439 883 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RPL5P22-201ENST00000480199 884 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 LSM3P4-201ENST00000502948 309 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC073358.1-201ENST00000505671 684 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 B4GALNT2P1-201ENST00000508857 307 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MTND6P2-201ENST00000512226 524 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 OR5H7P-201ENST00000514084 930 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 HSD3BP3-201ENST00000514706 994 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RNA5SP438-201ENST00000516561 112 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 SNORA70.20-201ENST00000516848 126 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AP003033.2-201ENST00000528901 805 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC002310.3-201ENST00000569728 723 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MIR3154-201ENST00000577829 84 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SL356P-201ENST00000582228 248 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC005726.4-201ENST00000582858 458 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC084373.1-201ENST00000603311 235 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AL133370.2-201ENST00000619934 439 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC022106.2-201ENST00000620114 757 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AC015908.5-201ENST00000623289 343 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AP001052.1-201ENST00000626421 99 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AL450326.2-201ENST00000421913 1962 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 NEPNP-201ENST00000404786 1371 ntBASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.5□□□□□ -1.85
SND1-IT1Q9HBX3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 OR55B1P-203ENST00000641518 2602 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 RNU1-150P-201ENST00000362491 162 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 RNA5SP232-201ENST00000364144 119 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 RNA5SP131-201ENST00000365452 119 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SKP292-201ENST00000365522 317 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 UBBP2-201ENST00000376781 231 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AC099336.2-201ENST00000422457 254 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AJ239321.1-201ENST00000424255 564 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 OR6D1P-201ENST00000436165 939 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 MTCYBP29-201ENST00000436327 1006 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 ARL5AP3-201ENST00000439327 386 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 BX842559.2-201ENST00000451418 605 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 VDAC2P4-201ENST00000452925 711 ntBASIC3.49□□□□□ -1.85
SND1-IT1Q9HBX3 AP000547.1-201ENST00000454360 617 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms