Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 CR381572.2-201ENST00000624852 397 ntBASIC7.59□□□□□ -1.19
SCAPERQ9BY12 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SCAPERQ9BY12 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SCAPERQ9BY12 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.59□□□□□ -1.2
SCAPERQ9BY12 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SCAPERQ9BY12 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
SCAPERQ9BY12 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 RN7SKP227-201ENST00000364445 330 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 RN7SKP153-201ENST00000365026 316 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 ATP5HP3-201ENST00000396994 486 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AL136116.2-201ENST00000404020 785 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AL354868.1-201ENST00000417077 482 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 RPS24P16-201ENST00000497294 392 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AC022360.1-201ENST00000521058 340 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AC084824.2-201ENST00000548906 345 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 SAMMSON-210ENST00000641260 1308 ntBASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC7.58□□□□□ -1.2
SCAPERQ9BY12 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 SNORA2.3-201ENST00000383920 135 ntBASIC7.57□□□□□ -1.2
SCAPERQ9BY12 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 NIP7P2-201ENST00000485801 544 ntBASIC7.57□□□□□ -1.2
SCAPERQ9BY12 AC079064.1-201ENST00000528365 362 ntBASIC7.57□□□□□ -1.2
SCAPERQ9BY12 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 RPL12P25-202ENST00000598100 674 ntBASIC7.57□□□□□ -1.2
SCAPERQ9BY12 AC093765.1-201ENST00000603758 881 ntBASIC7.57□□□□□ -1.2
SCAPERQ9BY12 AL356608.1-201ENST00000610034 820 ntBASIC7.57□□□□□ -1.2
SCAPERQ9BY12 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 CCT8P1-201ENST00000413611 1657 ntBASIC7.57□□□□□ -1.2
SCAPERQ9BY12 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SCAPERQ9BY12 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 MTCO1P15-201ENST00000529569 1526 ntBASIC7.56□□□□□ -1.2
SCAPERQ9BY12 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 IGKV7-3-201ENST00000357453 298 ntBASIC7.56□□□□□ -1.2
SCAPERQ9BY12 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 SNORA70.11-201ENST00000515987 138 ntBASIC7.56□□□□□ -1.2
SCAPERQ9BY12 SNORA70.13-201ENST00000516116 138 ntBASIC7.56□□□□□ -1.2
SCAPERQ9BY12 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 AC019322.1-201ENST00000571869 389 ntBASIC7.56□□□□□ -1.2
SCAPERQ9BY12 KPNA2P3-201ENST00000584190 848 ntBASIC7.56□□□□□ -1.2
SCAPERQ9BY12 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SCAPERQ9BY12 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 RN7SKP185-201ENST00000362813 326 ntBASIC7.55□□□□□ -1.2
SCAPERQ9BY12 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 RPL12P34-201ENST00000424532 479 ntBASIC7.55□□□□□ -1.2
SCAPERQ9BY12 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 KCTD10P1-201ENST00000434203 625 ntBASIC7.55□□□□□ -1.2
SCAPERQ9BY12 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 AL136455.1-201ENST00000441083 1240 ntBASIC7.55□□□□□ -1.2
SCAPERQ9BY12 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.55□□□□□ -1.2
SCAPERQ9BY12 AC098976.1-201ENST00000513014 541 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms