Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 OR9K1P-202ENST00000641111 3217 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 SNORA62-201ENST00000365493 153 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 RNU6-398P-201ENST00000384143 109 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 MIR1182-201ENST00000408363 97 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.68□□□□□ -1.5
RAD9AQ99638 C4BPAP2-201ENST00000428434 478 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 KNOP1P3-201ENST00000446933 426 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 OR6C72P-201ENST00000451403 892 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 AC108751.3-201ENST00000461814 1020 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 AC096741.1-201ENST00000472250 846 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 AC058823.1-201ENST00000485315 474 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.68□□□□□ -1.5
RAD9AQ99638 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.68□□□□□ -1.5
RAD9AQ99638 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RAD9AQ99638 MIR4691-201ENST00000583764 85 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 AC016911.1-201ENST00000613297 452 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 CR382285.2-201ENST00000624662 1495 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 AC007996.1-201ENST00000620414 2821 ntBASIC5.68□□□□□ -1.5
RAD9AQ99638 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD9AQ99638 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.68□□□□□ -1.5
RAD9AQ99638 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD9AQ99638 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.67□□□□□ -1.5
RAD9AQ99638 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RAD9AQ99638 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.67□□□□□ -1.5
RAD9AQ99638 AL356317.1-201ENST00000396110 1436 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AL121839.2-201ENST00000565058 6943 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAD9AQ99638 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAD9AQ99638 DBIP1-201ENST00000401435 260 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 SNORA11-201ENST00000408789 128 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.67□□□□□ -1.5
RAD9AQ99638 ARL4AP4-201ENST00000434170 518 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.67□□□□□ -1.5
RAD9AQ99638 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.67□□□□□ -1.5
RAD9AQ99638 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.67□□□□□ -1.5
RAD9AQ99638 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.67□□□□□ -1.5
RAD9AQ99638 NDUFA12P1-201ENST00000455914 406 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 RN7SL385P-201ENST00000468873 276 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 RN7SL188P-201ENST00000469842 285 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 SNRPCP3-201ENST00000474888 476 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AC007688.1-201ENST00000475592 759 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.67□□□□□ -1.5
RAD9AQ99638 ST13P12-201ENST00000508958 1094 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.67□□□□□ -1.5
RAD9AQ99638 OR5AN2P-201ENST00000534535 896 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 AC008126.1-201ENST00000549019 480 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AL512310.9-201ENST00000553311 948 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.67□□□□□ -1.5
RAD9AQ99638 BGLT3-201ENST00000564523 994 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AL451049.1-201ENST00000608672 497 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AC012414.7-202ENST00000622705 1090 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RAD9AQ99638 AC125336.1-201ENST00000508893 2827 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 AC097063.1-201ENST00000426714 1797 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RAD9AQ99638 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 CASC19-260ENST00000641828 2001 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 SAMM50P1-201ENST00000455403 1399 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 AC005261.6-201ENST00000623072 1387 ntBASIC5.67□□□□□ -1.5
RAD9AQ99638 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAD9AQ99638 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD9AQ99638 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms