Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC096708.4-201ENST00000620563 552 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC111152.1-202ENST00000635848 339 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AL357140.4-201ENST00000636827 412 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC4Q92889 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
ERCC4Q92889 MAPK10-338ENST00000641647 3362 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC4Q92889 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC116158.1-201ENST00000560231 2129 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC4Q92889 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AC068870.1-201ENST00000563737 2455 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 GNL2P1-201ENST00000451274 2190 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 AL356317.1-201ENST00000396110 1436 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 RN7SKP81-201ENST00000365603 331 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 AL391422.1-201ENST00000402155 436 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AKR1B10P1-201ENST00000425765 942 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 AC000041.1-201ENST00000439655 175 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC4Q92889 RPS27P5-201ENST00000444247 244 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 ZNF886P-201ENST00000450781 723 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 PRDX3P4-201ENST00000470828 747 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 RPL21P131-201ENST00000497298 483 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC4Q92889 GAPDHP71-201ENST00000511530 1003 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AC118465.1-201ENST00000513820 1271 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC4Q92889 OR8Q1P-201ENST00000526467 655 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC4Q92889 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AL109741.3-201ENST00000561748 592 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
ERCC4Q92889 MIR4271-201ENST00000582451 67 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AC006363.1-201ENST00000603806 463 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AC005252.1-201ENST00000604518 1063 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AL022394.1-201ENST00000606979 292 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AC122108.2-201ENST00000611946 526 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 AC078883.4-201ENST00000623218 367 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AL683826.1-201ENST00000624104 627 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 BX649567.1-201ENST00000642071 1134 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 GVINP1-202ENST00000531871 7271 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ERCC4Q92889 AP005432.1-201ENST00000580891 3485 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 TCP11X1-202ENST00000622971 1372 ntBASIC6.54□□□□□ -1.36
ERCC4Q92889 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC4Q92889 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC4Q92889 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC4Q92889 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
ERCC4Q92889 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 AC112255.1-201ENST00000624070 2493 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 RBPJP7-201ENST00000442803 1447 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 RBPJP5-201ENST00000449433 1447 ntBASIC6.53□□□□□ -1.36
ERCC4Q92889 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ERCC4Q92889 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC4Q92889 RNU6-1005P-201ENST00000384519 107 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms