Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 RN7SL329P-201ENST00000467740 299 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 PGAM1P13-201ENST00000507497 754 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC108120.2-201ENST00000512973 294 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 BUD31P1-201ENST00000521828 359 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AP001804.1-201ENST00000526868 919 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC023762.1-201ENST00000603280 584 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC024940.4-201ENST00000605507 246 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC025175.1-201ENST00000606482 759 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC078880.5-201ENST00000617845 421 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC099654.9-201ENST00000637055 678 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 NCOA4P2-201ENST00000340589 1813 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 PWAR1-201ENST00000624188 2414 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC003973.3-201ENST00000624863 2822 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 RNU6-481P-201ENST00000384194 107 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AL360271.1-201ENST00000395679 510 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 MTCO1P43-201ENST00000431831 488 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 OR6D1P-201ENST00000436165 939 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC245047.2-201ENST00000441060 530 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 RPS26P41-201ENST00000450370 284 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 CBX1P5-201ENST00000475330 559 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC020779.1-201ENST00000478757 796 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 RPSAP50-201ENST00000481955 852 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 RPS21P4-201ENST00000487122 248 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC004453.1-201ENST00000487895 408 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC010476.1-201ENST00000519111 851 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC109635.6-201ENST00000525487 1113 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AP000916.1-201ENST00000533869 835 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 HMGN2P47-201ENST00000559378 272 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC106734.1-201ENST00000568646 663 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC000068.2-201ENST00000608816 460 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AL355974.3-201ENST00000617383 467 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC090510.2-201ENST00000617465 629 ntBASIC5.65□□□□□ -1.5
HMGB4Q8WW32 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGB4Q8WW32 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 AC239868.2-201ENST00000564237 4527 ntBASIC5.65□□□□□ -1.51
HMGB4Q8WW32 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 AL034546.1-201ENST00000623740 3693 ntBASIC5.65□□□□□ -1.51
HMGB4Q8WW32 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HMGB4Q8WW32 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB4Q8WW32 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms