Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 OR8V1P-201ENST00000395193 873 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AL391361.1-201ENST00000405580 489 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 TMBIM7P-201ENST00000418074 855 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AP000281.1-201ENST00000444036 316 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC093166.2-201ENST00000455969 1017 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC091180.1-201ENST00000462104 372 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC020890.1-201ENST00000491837 504 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 BX510359.5-201ENST00000515651 304 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC078878.1-201ENST00000539832 958 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AL049872.1-201ENST00000556323 322 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC013244.1-201ENST00000604279 193 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 BNIP3P35-201ENST00000604530 490 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC112Q8NEF3 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AL672167.1-205ENST00000641112 3080 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC139713.2-215ENST00000641428 5037 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 RN7SKP160-201ENST00000363804 340 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 Z84478.1-201ENST00000438230 1219 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 SUMO2P3-201ENST00000438311 288 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 RPL7P40-201ENST00000481703 745 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AL049830.4-201ENST00000555149 351 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 MIR1273E-201ENST00000581165 102 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 SUMO2P15-201ENST00000604285 278 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AP000864.1-201ENST00000609424 650 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC097505.1-201ENST00000610199 565 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC007683.2-201ENST00000624681 714 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC099654.11-201ENST00000638857 294 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AC107068.1-201ENST00000563286 4218 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 AL133268.1-201ENST00000405676 1401 ntBASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC112Q8NEF3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 RNU1-146P-201ENST00000364015 165 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 RNA5SP132-201ENST00000364725 118 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AL034370.1-201ENST00000397254 1590 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 Z93019.1-201ENST00000416450 973 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 BMS1P17-202ENST00000416720 316 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 TNPO1P1-201ENST00000423641 1138 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AC019185.1-201ENST00000442718 389 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AC004980.3-201ENST00000447046 365 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 AC104634.1-201ENST00000452720 462 ntBASIC5.61□□□□□ -1.51
CCDC112Q8NEF3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms