Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
HERC6Q8IVU3 RNU6-609P-201ENST00000365459 107 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6□□□□□ -1.45
HERC6Q8IVU3 AL034403.1-201ENST00000399414 885 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 AL590399.2-201ENST00000427536 309 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6□□□□□ -1.45
HERC6Q8IVU3 AL049745.1-201ENST00000433953 286 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 HMGB3P10-201ENST00000434734 572 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 CEACAMP9-201ENST00000442990 513 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 AL353898.1-201ENST00000444055 238 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 AC009220.1-201ENST00000451614 275 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 OSTCP1-201ENST00000455507 450 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 EIF4A2P2-201ENST00000455776 1070 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 SUMO1P1-201ENST00000497904 306 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6□□□□□ -1.45
HERC6Q8IVU3 IGLV3-24-201ENST00000517477 197 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 HMGB1P40-201ENST00000525121 540 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 AC244502.2-201ENST00000543361 851 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6□□□□□ -1.45
HERC6Q8IVU3 RBM22P1-201ENST00000578589 1214 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6□□□□□ -1.45
HERC6Q8IVU3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6□□□□□ -1.45
HERC6Q8IVU3 AC012557.1-201ENST00000607115 611 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6□□□□□ -1.45
HERC6Q8IVU3 AC091953.3-201ENST00000623220 236 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6□□□□□ -1.45
HERC6Q8IVU3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6□□□□□ -1.45
HERC6Q8IVU3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6□□□□□ -1.45
HERC6Q8IVU3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6□□□□□ -1.45
HERC6Q8IVU3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6□□□□□ -1.45
HERC6Q8IVU3 CASC19-281ENST00000642118 1554 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 HSPD1P7-201ENST00000447985 1686 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6□□□□□ -1.45
HERC6Q8IVU3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HERC6Q8IVU3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HERC6Q8IVU3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RNU4-4P-201ENST00000364588 130 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RNU6-650P-201ENST00000365658 111 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 MIR141-201ENST00000384975 95 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RPL26P29-201ENST00000415623 438 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RPL5P13-201ENST00000462840 709 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC083982.1-201ENST00000485679 344 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RPL23AP73-201ENST00000492507 471 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 RNU6-941P-201ENST00000516346 108 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 VTA1P2-201ENST00000520205 911 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC013701.1-201ENST00000522657 465 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC109635.6-201ENST00000525487 1113 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC090424.1-201ENST00000535243 736 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC006518.1-201ENST00000541449 943 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 SNX6P1-201ENST00000601728 1224 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC069307.1-201ENST00000602820 447 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 BNIP3P19-201ENST00000605397 577 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 MIR1264-201ENST00000616374 69 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AL731566.2-201ENST00000618971 317 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 AC114947.2-201ENST00000565748 2125 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 KYNUP3-201ENST00000574386 1341 ntBASIC5.99□□□□□ -1.45
HERC6Q8IVU3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HERC6Q8IVU3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.98□□□□□ -1.45
HERC6Q8IVU3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms