Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC011933.2-201ENST00000578539 2790 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC133552.1-201ENST00000569988 4007 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AL034546.1-201ENST00000623740 3693 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 RNU4-68P-201ENST00000364314 141 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC087752.1-201ENST00000391360 558 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 PRELID1P1-201ENST00000403549 660 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC092447.3-201ENST00000426027 686 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 NPM1P22-201ENST00000427761 952 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 CXCR2P1-202ENST00000443392 1074 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AL929288.2-201ENST00000446368 407 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 RPS18P1-201ENST00000447840 458 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 CFL1P4-201ENST00000451536 498 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AL139824.2-201ENST00000458731 1095 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC073594.1-201ENST00000462065 364 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC090958.1-201ENST00000511122 351 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC092865.1-201ENST00000544395 1023 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC093591.2-201ENST00000565254 3843 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 MTCO1P40-201ENST00000574371 625 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC015802.2-201ENST00000589690 189 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 BNIP3P4-201ENST00000604946 565 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 FAM72A-208ENST00000607379 1139 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 MIR6885-201ENST00000612241 66 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AL138478.1-201ENST00000612252 832 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AC008691.1-209ENST00000642094 814 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 AP005432.1-201ENST00000580891 3485 ntBASIC5.69□□□□□ -1.5
RNF220Q5VTB9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF220Q5VTB9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RNF220Q5VTB9 RN7SKP128-201ENST00000364270 303 ntBASIC5.68□□□□□ -1.5
RNF220Q5VTB9 AL157702.1-201ENST00000398764 426 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms