Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 AL731566.1-201ENST00000620490 1937 ntBASIC4.93□□□□□ -1.62
RIF1Q5UIP0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 RNA5SP90-201ENST00000364801 99 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 RNA5SP372-201ENST00000390836 115 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 PHBP16-201ENST00000446318 950 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 RN7SKP106-201ENST00000410832 272 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 ARL4AP4-201ENST00000434170 518 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 AC021074.2-201ENST00000468434 172 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 RNA5SP392-201ENST00000516905 112 ntBASIC4.92□□□□□ -1.62
RIF1Q5UIP0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.92□□□□□ -1.62
RIF1Q5UIP0 RNU1-74P-201ENST00000384108 171 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 CYCSP10-201ENST00000417973 294 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 NRBF2P3-201ENST00000432731 865 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 OR7E125P-201ENST00000443450 846 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AL445687.2-201ENST00000458156 728 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC079168.1-201ENST00000458741 345 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC091912.1-201ENST00000511351 248 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC244502.2-201ENST00000543361 851 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 H3F3BP2-201ENST00000583907 357 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 ATP5F1P2-201ENST00000398143 760 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 HYALP1-201ENST00000417674 1279 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 HSFY6P-201ENST00000445573 403 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AL162739.1-201ENST00000450606 307 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 TTC41P-205ENST00000551270 3963 ntBASIC4.91□□□□□ -1.62
RIF1Q5UIP0 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
RIF1Q5UIP0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 RNGTTP1-201ENST00000420965 728 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 NUTF2P3-201ENST00000448540 384 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 SLC25A18P1-201ENST00000449385 454 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 AC108751.3-201ENST00000461814 1020 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 RPL23AP2-201ENST00000471227 466 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 AC006499.6-201ENST00000511169 607 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 AC020910.3-201ENST00000603701 874 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 MIR492-201ENST00000638676 116 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms