Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SCN1BQ07699 SELENOWP1-201ENST00000322792 252 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 OR1L6-202ENST00000373684 1044 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 RNU4-31P-201ENST00000384211 141 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 MIR130B-202ENST00000385018 82 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC005042.1-201ENST00000393397 800 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 TAF9BP2-201ENST00000400856 499 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 RN7SKP286-201ENST00000410894 299 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 RN7SKP97-201ENST00000410966 333 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN1BQ07699 NAP1L4P2-201ENST00000425958 899 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 RPL34P6-201ENST00000432390 345 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 TUBB4BP6-201ENST00000437576 479 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 MTND4P15-201ENST00000437913 1033 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 BMS1P10-201ENST00000443754 1120 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC016772.1-201ENST00000444170 1261 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 TIMM8BP2-201ENST00000445940 251 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AL589765.3-201ENST00000446084 462 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 UBFD1P1-201ENST00000473259 814 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 RN7SL568P-201ENST00000493069 298 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC098799.1-201ENST00000504752 800 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN1BQ07699 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN1BQ07699 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN1BQ07699 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC092709.1-201ENST00000521355 1045 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 WBP1LP3-201ENST00000523033 208 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AP003168.1-201ENST00000530091 307 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN1BQ07699 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN1BQ07699 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN1BQ07699 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC006349.1-201ENST00000555526 235 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AL109741.3-201ENST00000561748 592 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC233266.2-201ENST00000567067 528 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AP005119.1-201ENST00000580956 292 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 MIR5010-201ENST00000582846 120 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC124916.2-201ENST00000604416 224 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC145423.1-201ENST00000605712 336 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC116447.1-201ENST00000613153 453 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AL139099.4-201ENST00000614802 114 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AL645927.2-201ENST00000618350 349 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC011815.3-201ENST00000624194 473 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 AC015726.3-201ENST00000624501 418 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN1BQ07699 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC027088.4-201ENST00000611559 1947 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN1BQ07699 SNORA51.9-201ENST00000384295 124 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 LINC01881-201ENST00000416103 412 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 FAM183DP-201ENST00000421987 399 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 MORF4L1P7-201ENST00000426038 703 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 HSPD1P12-201ENST00000429127 1069 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 DEFA9P-201ENST00000433042 285 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AL353597.2-202ENST00000434901 373 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AL450263.2-201ENST00000439400 589 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC005077.1-201ENST00000449226 375 ntBASIC4.92□□□□□ -1.62
SCN1BQ07699 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN1BQ07699 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN1BQ07699 RN7SL273P-201ENST00000481561 299 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms