Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 RNU6-1028P-201ENST00000517164 93 ntBASIC5.37□□□□□ -1.55
RAE1P78406 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.37□□□□□ -1.55
RAE1P78406 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 AC122688.1-201ENST00000541494 223 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.37□□□□□ -1.55
RAE1P78406 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 AC134669.1-201ENST00000581275 672 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AC015802.2-201ENST00000589690 189 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AP002906.1-201ENST00000603405 233 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AC012557.1-201ENST00000607115 611 ntBASIC5.37□□□□□ -1.55
RAE1P78406 PART1_2.1-201ENST00000612397 250 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AC006386.1-201ENST00000619436 415 ntBASIC5.37□□□□□ -1.55
RAE1P78406 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 AL355578.1-201ENST00000607405 1328 ntBASIC5.37□□□□□ -1.55
RAE1P78406 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AL034546.1-201ENST00000623740 3693 ntBASIC5.37□□□□□ -1.55
RAE1P78406 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RAE1P78406 RNA5SP514-201ENST00000363717 111 ntBASIC5.36□□□□□ -1.55
RAE1P78406 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RAE1P78406 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 AC010385.1-201ENST00000412374 256 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 AL022331.1-201ENST00000429025 477 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 MTND2P40-201ENST00000436718 841 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 MED28P3-201ENST00000444288 531 ntBASIC5.36□□□□□ -1.55
RAE1P78406 LINC02210-201ENST00000444561 288 ntBASIC5.36□□□□□ -1.55
RAE1P78406 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.36□□□□□ -1.55
RAE1P78406 GTF2IP12-201ENST00000456547 356 ntBASIC5.36□□□□□ -1.55
RAE1P78406 RN7SL197P-201ENST00000466981 299 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC128716.1-201ENST00000475129 166 ntBASIC5.36□□□□□ -1.55
RAE1P78406 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 MTCO3P35-201ENST00000485582 781 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 MTCYBP35-201ENST00000503630 1137 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 AC006499.4-201ENST00000510947 694 ntBASIC5.36□□□□□ -1.55
RAE1P78406 RNU6-1308P-201ENST00000516817 103 ntBASIC5.36□□□□□ -1.55
RAE1P78406 IGHV3-63-201ENST00000518422 341 ntBASIC5.36□□□□□ -1.55
RAE1P78406 MRPS16P1-201ENST00000523462 412 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 MTATP6P15-201ENST00000527233 835 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC079064.1-201ENST00000528365 362 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 AC008126.1-201ENST00000549019 480 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.36□□□□□ -1.55
RAE1P78406 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 AC092121.1-201ENST00000569452 202 ntBASIC5.36□□□□□ -1.55
RAE1P78406 MIR4311-201ENST00000580794 100 ntBASIC5.36□□□□□ -1.55
RAE1P78406 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.36□□□□□ -1.55
RAE1P78406 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms