Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC010245.2-201ENST00000606908 1167 ntBASIC5.62□□□□□ -1.51
TPM4P67936 SNORD91B-202ENST00000608459 222 ntBASIC5.62□□□□□ -1.51
TPM4P67936 RN7SL787P-201ENST00000613000 284 ntBASIC5.62□□□□□ -1.51
TPM4P67936 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 AL122125.1-201ENST00000616999 600 ntBASIC5.62□□□□□ -1.51
TPM4P67936 SAMMSON-209ENST00000641222 1100 ntBASIC5.62□□□□□ -1.51
TPM4P67936 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM4P67936 CDY3P-201ENST00000454543 1618 ntBASIC5.62□□□□□ -1.51
TPM4P67936 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TPM4P67936 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TPM4P67936 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.62□□□□□ -1.51
TPM4P67936 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TPM4P67936 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 MAPK10-286ENST00000641208 8747 ntBASIC5.61□□□□□ -1.51
TPM4P67936 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 SDHDP6-201ENST00000414693 480 ntBASIC5.61□□□□□ -1.51
TPM4P67936 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM4P67936 AL133325.1-201ENST00000421090 382 ntBASIC5.61□□□□□ -1.51
TPM4P67936 AC092162.1-201ENST00000432828 434 ntBASIC5.61□□□□□ -1.51
TPM4P67936 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM4P67936 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM4P67936 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM4P67936 EIF1P7-201ENST00000487533 337 ntBASIC5.61□□□□□ -1.51
TPM4P67936 AL117692.1-201ENST00000494283 713 ntBASIC5.61□□□□□ -1.51
TPM4P67936 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM4P67936 TCP11X3P-202ENST00000514289 1254 ntBASIC5.61□□□□□ -1.51
TPM4P67936 RFPL4AP5-201ENST00000514977 504 ntBASIC5.61□□□□□ -1.51
TPM4P67936 Vault.2-201ENST00000516519 98 ntBASIC5.61□□□□□ -1.51
TPM4P67936 DDX18P5-201ENST00000534547 1306 ntBASIC5.61□□□□□ -1.51
TPM4P67936 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM4P67936 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.61□□□□□ -1.51
TPM4P67936 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM4P67936 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM4P67936 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM4P67936 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.61□□□□□ -1.51
TPM4P67936 AL353600.1-201ENST00000608148 251 ntBASIC5.61□□□□□ -1.51
TPM4P67936 OR8G7P-201ENST00000616658 848 ntBASIC5.61□□□□□ -1.51
TPM4P67936 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
TPM4P67936 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TPM4P67936 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TPM4P67936 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 CASC19-206ENST00000641028 1430 ntBASIC5.6□□□□□ -1.51
TPM4P67936 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 MTHFD2P5-201ENST00000320415 844 ntBASIC5.6□□□□□ -1.51
TPM4P67936 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM4P67936 RPS4XP16-201ENST00000427198 791 ntBASIC5.6□□□□□ -1.51
TPM4P67936 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM4P67936 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 AC100832.1-201ENST00000471945 383 ntBASIC5.6□□□□□ -1.51
TPM4P67936 SIAH1P1-201ENST00000479411 923 ntBASIC5.6□□□□□ -1.51
TPM4P67936 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TPM4P67936 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM4P67936 IGKV2-4-201ENST00000523070 340 ntBASIC5.6□□□□□ -1.51
TPM4P67936 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM4P67936 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TPM4P67936 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM4P67936 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.6□□□□□ -1.51
TPM4P67936 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.6□□□□□ -1.51
TPM4P67936 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 HSPA8P18-201ENST00000439846 1928 ntBASIC5.6□□□□□ -1.51
TPM4P67936 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM4P67936 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TPM4P67936 AC092435.4-201ENST00000623012 4159 ntBASIC5.59□□□□□ -1.51
TPM4P67936 UGT2B26P-201ENST00000508672 1613 ntBASIC5.59□□□□□ -1.51
TPM4P67936 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
TPM4P67936 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM4P67936 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM4P67936 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNA5SP234-201ENST00000363916 119 ntBASIC5.59□□□□□ -1.51
TPM4P67936 AL353625.1-202ENST00000366273 571 ntBASIC5.59□□□□□ -1.51
TPM4P67936 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 MIR600-201ENST00000385007 98 ntBASIC5.59□□□□□ -1.51
TPM4P67936 RNA5SP339-201ENST00000390987 122 ntBASIC5.59□□□□□ -1.51
TPM4P67936 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TPM4P67936 GABARAPL3-201ENST00000412799 354 ntBASIC5.59□□□□□ -1.51
TPM4P67936 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM4P67936 QRSL1P2-201ENST00000418582 964 ntBASIC5.59□□□□□ -1.51
TPM4P67936 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.59□□□□□ -1.51
TPM4P67936 FABP7P2-201ENST00000429946 379 ntBASIC5.59□□□□□ -1.51
TPM4P67936 SUMO2P3-201ENST00000438311 288 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms