Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RN7SL52P-201ENST00000584271 284 ntBASIC3.44□□□□□ -1.86
RPL39P62891 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.44□□□□□ -1.86
RPL39P62891 AC069307.1-201ENST00000602820 447 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AL353600.1-201ENST00000608148 251 ntBASIC3.44□□□□□ -1.86
RPL39P62891 RN7SL787P-201ENST00000613000 284 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 AL096712.1-201ENST00000614561 159 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AC005086.4-201ENST00000623065 213 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AC073593.1-201ENST00000624500 411 ntBASIC3.44□□□□□ -1.86
RPL39P62891 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 DHX9P1-201ENST00000436565 3076 ntBASIC3.43□□□□□ -1.86
RPL39P62891 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 ECM1P2-201ENST00000503354 1577 ntBASIC3.43□□□□□ -1.86
RPL39P62891 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RPL39P62891 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RPL39P62891 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.43□□□□□ -1.86
RPL39P62891 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.43□□□□□ -1.86
RPL39P62891 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 IL6STP1-201ENST00000346911 1020 ntBASIC3.43□□□□□ -1.86
RPL39P62891 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 AC023490.2-201ENST00000359859 470 ntBASIC3.43□□□□□ -1.86
RPL39P62891 MIR195-201ENST00000385194 87 ntBASIC3.43□□□□□ -1.86
RPL39P62891 ATP5HP3-201ENST00000396994 486 ntBASIC3.43□□□□□ -1.86
RPL39P62891 OR7E156P-201ENST00000400303 464 ntBASIC3.43□□□□□ -1.86
RPL39P62891 RN7SKP114-201ENST00000410327 279 ntBASIC3.43□□□□□ -1.86
RPL39P62891 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.43□□□□□ -1.86
RPL39P62891 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.43□□□□□ -1.86
RPL39P62891 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.43□□□□□ -1.86
RPL39P62891 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.43□□□□□ -1.86
RPL39P62891 CYCSP12-201ENST00000437729 300 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC064862.4-201ENST00000442180 334 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 TCEA1P1-201ENST00000449716 880 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.43□□□□□ -1.86
RPL39P62891 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 AL136038.1-201ENST00000497246 351 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC021146.3-201ENST00000511911 260 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.43□□□□□ -1.86
RPL39P62891 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RPL39P62891 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 GSTP1P1-201ENST00000548078 319 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.43□□□□□ -1.86
RPL39P62891 WDR61-205ENST00000558459 884 ntTSL 3 BASIC3.43□□□□□ -1.86
RPL39P62891 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.43□□□□□ -1.86
RPL39P62891 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.43□□□□□ -1.86
RPL39P62891 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.43□□□□□ -1.86
RPL39P62891 EIF1P5-201ENST00000585002 234 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.43□□□□□ -1.86
RPL39P62891 FO393422.1-201ENST00000603908 708 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.43□□□□□ -1.86
RPL39P62891 SUGT1P3-202ENST00000604259 383 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC087783.2-201ENST00000605070 562 ntBASIC3.43□□□□□ -1.86
RPL39P62891 AC019206.1-201ENST00000621938 425 ntBASIC3.43□□□□□ -1.86
RPL39P62891 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.43□□□□□ -1.86
RPL39P62891 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.43□□□□□ -1.86
RPL39P62891 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.43□□□□□ -1.86
RPL39P62891 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
RPL39P62891 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL39P62891 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RPL39P62891 AL445487.1-201ENST00000415694 1580 ntBASIC3.42□□□□□ -1.86
RPL39P62891 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.42□□□□□ -1.86
RPL39P62891 AL513548.1-201ENST00000562904 1724 ntBASIC3.42□□□□□ -1.86
RPL39P62891 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPL39P62891 RN7SKP124-201ENST00000364730 341 ntBASIC3.42□□□□□ -1.86
RPL39P62891 SNORA67-201ENST00000384423 137 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AL080315.1-201ENST00000406055 466 ntBASIC3.42□□□□□ -1.86
RPL39P62891 SEPT7P8-201ENST00000413308 775 ntBASIC3.42□□□□□ -1.86
RPL39P62891 RPS3P2-201ENST00000421346 701 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AC093655.2-201ENST00000425735 631 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.42□□□□□ -1.86
RPL39P62891 ARL4AP3-201ENST00000441452 574 ntBASIC3.42□□□□□ -1.86
RPL39P62891 IGHV5-78-201ENST00000450948 295 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AC005008.1-201ENST00000456151 612 ntBASIC3.42□□□□□ -1.86
RPL39P62891 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
RPL39P62891 RN7SL547P-201ENST00000490793 290 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AC092349.1-201ENST00000504903 310 ntBASIC3.42□□□□□ -1.86
RPL39P62891 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.42□□□□□ -1.86
RPL39P62891 UGT2A3P7-201ENST00000510485 734 ntBASIC3.42□□□□□ -1.86
RPL39P62891 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC3.42□□□□□ -1.86
RPL39P62891 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.42□□□□□ -1.86
RPL39P62891 AC126177.5-201ENST00000549599 178 ntBASIC3.42□□□□□ -1.86
RPL39P62891 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms