Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB38P57729 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
RAB38P57729 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAB38P57729 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RAB38P57729 SNORA66-201ENST00000384792 133 ntBASIC4.79□□□□□ -1.64
RAB38P57729 DPPA2P3-201ENST00000411853 655 ntBASIC4.79□□□□□ -1.64
RAB38P57729 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB38P57729 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB38P57729 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB38P57729 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB38P57729 AC073850.1-201ENST00000449243 255 ntBASIC4.79□□□□□ -1.64
RAB38P57729 HMGN2P25-201ENST00000486956 268 ntBASIC4.79□□□□□ -1.64
RAB38P57729 RN7SL441P-201ENST00000492388 296 ntBASIC4.79□□□□□ -1.64
RAB38P57729 MORF4L2P1-201ENST00000503761 858 ntBASIC4.79□□□□□ -1.64
RAB38P57729 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB38P57729 AC008638.1-201ENST00000506035 866 ntBASIC4.79□□□□□ -1.64
RAB38P57729 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB38P57729 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB38P57729 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB38P57729 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.79□□□□□ -1.64
RAB38P57729 AC006349.1-201ENST00000555526 235 ntBASIC4.79□□□□□ -1.64
RAB38P57729 NDUFB4P11-201ENST00000560510 395 ntBASIC4.79□□□□□ -1.64
RAB38P57729 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.79□□□□□ -1.64
RAB38P57729 AC092944.2-201ENST00000605443 889 ntBASIC4.79□□□□□ -1.64
RAB38P57729 Z95327.3-201ENST00000610385 572 ntBASIC4.79□□□□□ -1.64
RAB38P57729 AC016769.4-201ENST00000616893 535 ntBASIC4.79□□□□□ -1.64
RAB38P57729 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB38P57729 FRG1EP-201ENST00000634469 770 ntBASIC4.79□□□□□ -1.64
RAB38P57729 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RAB38P57729 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB38P57729 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB38P57729 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB38P57729 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB38P57729 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB38P57729 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB38P57729 MAPK10-328ENST00000641553 4009 ntBASIC4.79□□□□□ -1.64
RAB38P57729 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB38P57729 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB38P57729 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.78□□□□□ -1.64
RAB38P57729 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 HSPA8P18-201ENST00000439846 1928 ntBASIC4.78□□□□□ -1.64
RAB38P57729 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 AC008079.2-201ENST00000623543 20396 ntBASIC4.78□□□□□ -1.64
RAB38P57729 RNA5SP305-201ENST00000362665 119 ntBASIC4.78□□□□□ -1.64
RAB38P57729 RNA5SP455-201ENST00000365190 119 ntBASIC4.78□□□□□ -1.64
RAB38P57729 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RAB38P57729 SPTLC1P2-201ENST00000407089 121 ntBASIC4.78□□□□□ -1.64
RAB38P57729 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.78□□□□□ -1.64
RAB38P57729 RPL23AP27-201ENST00000415161 451 ntBASIC4.78□□□□□ -1.64
RAB38P57729 BX323845.1-201ENST00000432417 179 ntBASIC4.78□□□□□ -1.64
RAB38P57729 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB38P57729 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB38P57729 NIFKP7-201ENST00000503365 834 ntBASIC4.78□□□□□ -1.64
RAB38P57729 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RAB38P57729 MYL12BP2-201ENST00000503948 512 ntBASIC4.78□□□□□ -1.64
RAB38P57729 AC010350.1-201ENST00000504908 231 ntBASIC4.78□□□□□ -1.64
RAB38P57729 AC004980.4-201ENST00000513375 203 ntBASIC4.78□□□□□ -1.64
RAB38P57729 FTH1P11-201ENST00000517577 551 ntBASIC4.78□□□□□ -1.64
RAB38P57729 AC013701.1-201ENST00000522657 465 ntBASIC4.78□□□□□ -1.64
RAB38P57729 OR7E128P-201ENST00000532736 1024 ntBASIC4.78□□□□□ -1.64
RAB38P57729 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 NMNAT1P1-201ENST00000554095 876 ntBASIC4.78□□□□□ -1.64
RAB38P57729 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB38P57729 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 AC018445.2-201ENST00000622987 260 ntBASIC4.78□□□□□ -1.64
RAB38P57729 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
RAB38P57729 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB38P57729 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
RAB38P57729 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB38P57729 TET1P1-201ENST00000426627 2301 ntBASIC4.78□□□□□ -1.64
RAB38P57729 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
RAB38P57729 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.65
RAB38P57729 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
RAB38P57729 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB38P57729 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB38P57729 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB38P57729 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB38P57729 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB38P57729 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
RAB38P57729 MIR105-2-201ENST00000385083 81 ntBASIC4.77□□□□□ -1.65
RAB38P57729 AC005522.1-201ENST00000395416 346 ntBASIC4.77□□□□□ -1.65
RAB38P57729 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms