Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RN7SL441P-201ENST00000492388 296 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 RPS4XP20-201ENST00000505751 772 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 GTF2F2P1-201ENST00000511083 675 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 RNA5SP303-201ENST00000516192 130 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 RNU6-943P-201ENST00000516960 98 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 OR10D4P-201ENST00000525892 951 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.99□□□□□ -1.61
PKNOX1P55347 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.99□□□□□ -1.61
PKNOX1P55347 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PKNOX1P55347 AC008126.1-201ENST00000549019 480 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
PKNOX1P55347 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.99□□□□□ -1.61
PKNOX1P55347 NDUFB4P11-201ENST00000560510 395 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.99□□□□□ -1.61
PKNOX1P55347 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.99□□□□□ -1.61
PKNOX1P55347 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.99□□□□□ -1.61
PKNOX1P55347 AL451049.1-201ENST00000608672 497 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.99□□□□□ -1.61
PKNOX1P55347 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.99□□□□□ -1.61
PKNOX1P55347 AL513548.1-201ENST00000562904 1724 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PKNOX1P55347 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.99□□□□□ -1.61
PKNOX1P55347 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
PKNOX1P55347 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKNOX1P55347 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.99□□□□□ -1.61
PKNOX1P55347 ZNF652P1-201ENST00000442420 1309 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AC233968.1-201ENST00000611212 1300 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PKNOX1P55347 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AL031985.1-201ENST00000392713 418 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AC013442.1-201ENST00000397347 228 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.98□□□□□ -1.61
PKNOX1P55347 CDY17P-201ENST00000414121 1282 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 MTND4LP21-201ENST00000415303 295 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 RPL36AP10-201ENST00000421785 322 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.98□□□□□ -1.61
PKNOX1P55347 KCTD9P1-201ENST00000430462 1167 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 PPIAP19-201ENST00000486414 492 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 AC008521.2-201ENST00000591021 259 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AC069307.1-201ENST00000602820 447 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AC126175.1-201ENST00000617041 758 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 MIR6778-201ENST00000617912 73 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AC087821.1-201ENST00000623639 567 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 CYP4F35P-202ENST00000636121 390 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 SCARNA15-201ENST00000607520 4325 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PKNOX1P55347 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.98□□□□□ -1.61
PKNOX1P55347 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PKNOX1P55347 PCAT14-202ENST00000627127 3935 ntBASIC4.98□□□□□ -1.61
PKNOX1P55347 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PKNOX1P55347 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PKNOX1P55347 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.97□□□□□ -1.61
PKNOX1P55347 AL672167.1-205ENST00000641112 3080 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 RN7SKP113-201ENST00000363891 295 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 SNORA67-201ENST00000384423 137 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 MIR621-201ENST00000384919 96 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 AC009804.1-201ENST00000400949 179 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 MIR1182-201ENST00000408363 97 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 MIR1271-201ENST00000408537 86 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.97□□□□□ -1.61
PKNOX1P55347 AL034379.1-201ENST00000423216 253 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 EI24P4-201ENST00000423683 1078 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.97□□□□□ -1.61
PKNOX1P55347 AP002371.1-201ENST00000463604 433 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 TRBV8-1-201ENST00000481590 279 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 RFPL4AP5-201ENST00000514977 504 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.97□□□□□ -1.61
PKNOX1P55347 AP000859.1-201ENST00000525536 307 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.97□□□□□ -1.61
PKNOX1P55347 MTND2P17-201ENST00000550281 688 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 AL512310.9-201ENST00000553311 948 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 SETP1-201ENST00000556014 845 ntBASIC4.97□□□□□ -1.61
PKNOX1P55347 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKNOX1P55347 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms