Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP002345.1-201ENST00000456493 928 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 RPS17P15-201ENST00000475609 349 ntBASIC4.98□□□□□ -1.61
CDH11P55287 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 AL049874.2-201ENST00000492636 288 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AC009120.1-201ENST00000493458 473 ntBASIC4.98□□□□□ -1.61
CDH11P55287 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH11P55287 AC098976.1-201ENST00000513014 541 ntBASIC4.98□□□□□ -1.61
CDH11P55287 ATP5LP3-201ENST00000514223 304 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH11P55287 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH11P55287 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 AC005776.1-201ENST00000603164 290 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AC108738.1-201ENST00000603703 237 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AC084824.5-201ENST00000612009 413 ntBASIC4.98□□□□□ -1.61
CDH11P55287 CR589904.2-201ENST00000612533 440 ntBASIC4.98□□□□□ -1.61
CDH11P55287 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AC025016.1-201ENST00000616746 682 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AC022919.1-201ENST00000624979 626 ntBASIC4.98□□□□□ -1.61
CDH11P55287 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 AC019072.1-201ENST00000604535 1551 ntBASIC4.98□□□□□ -1.61
CDH11P55287 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 AC093591.2-201ENST00000565254 3843 ntBASIC4.98□□□□□ -1.61
CDH11P55287 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 AC110792.3-201ENST00000595906 1614 ntBASIC4.97□□□□□ -1.61
CDH11P55287 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDH11P55287 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 AL034549.2-201ENST00000618285 3373 ntBASIC4.97□□□□□ -1.61
CDH11P55287 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 AC112255.1-201ENST00000624070 2493 ntBASIC4.97□□□□□ -1.61
CDH11P55287 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDH11P55287 AL356057.1-202ENST00000402263 756 ntBASIC4.97□□□□□ -1.61
CDH11P55287 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 BMS1P17-202ENST00000416720 316 ntBASIC4.97□□□□□ -1.61
CDH11P55287 GTF3AP1-201ENST00000416942 1004 ntBASIC4.97□□□□□ -1.61
CDH11P55287 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 AP000797.2-201ENST00000475768 606 ntBASIC4.97□□□□□ -1.61
CDH11P55287 AC090543.1-201ENST00000492168 485 ntBASIC4.97□□□□□ -1.61
CDH11P55287 RPS4XP14-201ENST00000493072 781 ntBASIC4.97□□□□□ -1.61
CDH11P55287 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 AC074087.1-201ENST00000512059 724 ntBASIC4.97□□□□□ -1.61
CDH11P55287 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 CDC42P3-201ENST00000518493 633 ntBASIC4.97□□□□□ -1.61
CDH11P55287 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.97□□□□□ -1.61
CDH11P55287 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 HSPE1P2-201ENST00000554777 306 ntBASIC4.97□□□□□ -1.61
CDH11P55287 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH11P55287 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH11P55287 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 KATNBL1P5-201ENST00000605015 517 ntBASIC4.97□□□□□ -1.61
CDH11P55287 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.97□□□□□ -1.61
CDH11P55287 AP000240.1-201ENST00000609910 452 ntBASIC4.97□□□□□ -1.61
CDH11P55287 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 AC008115.3-201ENST00000614874 549 ntBASIC4.97□□□□□ -1.61
CDH11P55287 AC091932.2-201ENST00000623014 291 ntBASIC4.97□□□□□ -1.61
CDH11P55287 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH11P55287 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH11P55287 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH11P55287 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDH11P55287 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms