Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX3P41225 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX3P41225 AL353625.1-202ENST00000366273 571 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC007618.1-201ENST00000366455 732 ntBASIC4.96□□□□□ -1.62
SOX3P41225 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SOX3P41225 SNORA67-201ENST00000384423 137 ntBASIC4.96□□□□□ -1.62
SOX3P41225 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SOX3P41225 RNA5SP487-201ENST00000410186 122 ntBASIC4.96□□□□□ -1.62
SOX3P41225 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX3P41225 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.96□□□□□ -1.62
SOX3P41225 RPL7AP49-201ENST00000429522 581 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX3P41225 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX3P41225 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX3P41225 AL591438.1-201ENST00000433508 581 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX3P41225 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX3P41225 MTCO3P43-201ENST00000440974 771 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AL606490.8-201ENST00000441624 319 ntBASIC4.96□□□□□ -1.62
SOX3P41225 GAPDHP25-201ENST00000447061 1001 ntBASIC4.96□□□□□ -1.62
SOX3P41225 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX3P41225 RN7SL172P-201ENST00000460535 303 ntBASIC4.96□□□□□ -1.62
SOX3P41225 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.96□□□□□ -1.62
SOX3P41225 AL049829.1-201ENST00000465411 156 ntBASIC4.96□□□□□ -1.62
SOX3P41225 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX3P41225 RPS21P4-201ENST00000487122 248 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AL049874.2-201ENST00000492636 288 ntBASIC4.96□□□□□ -1.62
SOX3P41225 MYL12BP2-201ENST00000503948 512 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC008638.1-201ENST00000506035 866 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC098976.1-201ENST00000513014 541 ntBASIC4.96□□□□□ -1.62
SOX3P41225 OR7E10P-201ENST00000526420 991 ntBASIC4.96□□□□□ -1.62
SOX3P41225 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX3P41225 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX3P41225 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX3P41225 AC012414.2-201ENST00000559474 187 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX3P41225 AC027281.1-201ENST00000574178 758 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX3P41225 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX3P41225 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX3P41225 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX3P41225 CYP4F35P-202ENST00000636121 390 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC074101.1-201ENST00000637861 241 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AC119674.1-220ENST00000641502 1048 ntBASIC4.96□□□□□ -1.62
SOX3P41225 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX3P41225 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX3P41225 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SOX3P41225 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX3P41225 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX3P41225 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX3P41225 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SOX3P41225 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SOX3P41225 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SOX3P41225 AL450345.1-202ENST00000605741 3881 ntBASIC4.95□□□□□ -1.62
SOX3P41225 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX3P41225 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX3P41225 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX3P41225 U3.2-201ENST00000362981 210 ntBASIC4.95□□□□□ -1.62
SOX3P41225 MIR223-201ENST00000385204 110 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC007068.1-201ENST00000396690 844 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX3P41225 AL356806.1-201ENST00000422524 916 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC108075.1-201ENST00000424692 529 ntBASIC4.95□□□□□ -1.62
SOX3P41225 ZFAND6P1-201ENST00000434138 605 ntBASIC4.95□□□□□ -1.62
SOX3P41225 OR52B5P-201ENST00000435337 951 ntBASIC4.95□□□□□ -1.62
SOX3P41225 CNOT7P2-201ENST00000441051 832 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC245047.2-201ENST00000441060 530 ntBASIC4.95□□□□□ -1.62
SOX3P41225 RPS11P7-201ENST00000442125 465 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC090804.1-201ENST00000448870 490 ntBASIC4.95□□□□□ -1.62
SOX3P41225 FAR2P1-206ENST00000449736 709 ntBASIC4.95□□□□□ -1.62
SOX3P41225 MYO5BP2-201ENST00000449815 1277 ntBASIC4.95□□□□□ -1.62
SOX3P41225 MORF4L1P4-201ENST00000450245 976 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AURKAPS1-201ENST00000451805 1212 ntBASIC4.95□□□□□ -1.62
SOX3P41225 PRPF38AP1-201ENST00000451976 933 ntBASIC4.95□□□□□ -1.62
SOX3P41225 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX3P41225 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX3P41225 AC026348.1-201ENST00000462549 1053 ntBASIC4.95□□□□□ -1.62
SOX3P41225 OR9N1P-201ENST00000491296 333 ntBASIC4.95□□□□□ -1.62
SOX3P41225 IGBP1P4-201ENST00000503202 879 ntBASIC4.95□□□□□ -1.62
SOX3P41225 ASNSP4-201ENST00000511103 447 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX3P41225 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.95□□□□□ -1.62
SOX3P41225 OR8G3P-201ENST00000533406 921 ntBASIC4.95□□□□□ -1.62
SOX3P41225 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX3P41225 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX3P41225 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX3P41225 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
SOX3P41225 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.95□□□□□ -1.62
SOX3P41225 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX3P41225 MTCYBP13-201ENST00000578634 1093 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC127024.5-201ENST00000580085 462 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC013244.1-201ENST00000604279 193 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AL356608.1-201ENST00000610034 820 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AP002505.2-201ENST00000623585 696 ntBASIC4.95□□□□□ -1.62
SOX3P41225 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.95□□□□□ -1.62
SOX3P41225 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SOX3P41225 OR52B5P-202ENST00000641118 1110 ntBASIC4.95□□□□□ -1.62
SOX3P41225 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SOX3P41225 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.95□□□□□ -1.62
SOX3P41225 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms