Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RFX1P22670 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 RNY4P24-201ENST00000362735 96 ntBASIC7.59□□□□□ -1.19
RFX1P22670 RN7SKP187-201ENST00000365536 330 ntBASIC7.59□□□□□ -1.19
RFX1P22670 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RFX1P22670 RNU6-225P-201ENST00000384613 103 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC007066.1-201ENST00000392902 381 ntBASIC7.59□□□□□ -1.19
RFX1P22670 RPL23AP29-201ENST00000397284 453 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 IPMKP1-201ENST00000425988 855 ntBASIC7.59□□□□□ -1.19
RFX1P22670 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 AC112492.2-201ENST00000432774 1030 ntBASIC7.59□□□□□ -1.19
RFX1P22670 UBE2V1P8-201ENST00000437166 265 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 AC005517.1-201ENST00000452091 489 ntBASIC7.59□□□□□ -1.19
RFX1P22670 RPL18AP17-201ENST00000455326 198 ntBASIC7.59□□□□□ -1.19
RFX1P22670 SNRPFP4-201ENST00000456366 242 ntBASIC7.59□□□□□ -1.19
RFX1P22670 NF1P3-201ENST00000457709 450 ntBASIC7.59□□□□□ -1.19
RFX1P22670 RPSAP48-201ENST00000466509 889 ntBASIC7.59□□□□□ -1.19
RFX1P22670 TMED11P-201ENST00000479478 690 ntBASIC7.59□□□□□ -1.19
RFX1P22670 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 MYL12BP2-201ENST00000503948 512 ntBASIC7.59□□□□□ -1.19
RFX1P22670 NACAP5-201ENST00000509863 636 ntBASIC7.59□□□□□ -1.19
RFX1P22670 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 RN7SKP183-201ENST00000517169 324 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC027309.2-201ENST00000520566 192 ntBASIC7.59□□□□□ -1.19
RFX1P22670 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.59□□□□□ -1.19
RFX1P22670 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 ACTG1P15-201ENST00000570019 1063 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 SNORA70D-201ENST00000578836 135 ntBASIC7.59□□□□□ -1.19
RFX1P22670 KPNA2P3-201ENST00000584190 848 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC087575.1-201ENST00000585087 229 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC091135.1-201ENST00000585943 307 ntBASIC7.59□□□□□ -1.19
RFX1P22670 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 AL137072.1-201ENST00000603444 466 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC015819.1-201ENST00000613588 663 ntBASIC7.59□□□□□ -1.19
RFX1P22670 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.59□□□□□ -1.19
RFX1P22670 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 AP000648.2-201ENST00000624182 404 ntBASIC7.59□□□□□ -1.19
RFX1P22670 AC079228.1-201ENST00000624774 1049 ntBASIC7.59□□□□□ -1.19
RFX1P22670 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 SPATA31C2-201ENST00000324915 3777 ntBASIC7.59□□□□□ -1.19
RFX1P22670 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RFX1P22670 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
RFX1P22670 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 ASNSP6-201ENST00000592770 1618 ntBASIC7.59□□□□□ -1.19
RFX1P22670 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RFX1P22670 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
RFX1P22670 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.59□□□□□ -1.2
RFX1P22670 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.59□□□□□ -1.2
RFX1P22670 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.59□□□□□ -1.2
RFX1P22670 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 AC010168.2-201ENST00000562691 5428 ntBASIC7.58□□□□□ -1.2
RFX1P22670 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 MAPK10-323ENST00000641493 3207 ntBASIC7.58□□□□□ -1.2
RFX1P22670 OR5BR1P-201ENST00000524992 1330 ntBASIC7.58□□□□□ -1.2
RFX1P22670 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RFX1P22670 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
RFX1P22670 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.58□□□□□ -1.2
RFX1P22670 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 AL356361.1-201ENST00000400943 1459 ntBASIC7.58□□□□□ -1.2
RFX1P22670 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 AC103591.2-201ENST00000265259 766 ntBASIC7.58□□□□□ -1.2
RFX1P22670 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 Y_RNA.582-201ENST00000391023 95 ntBASIC7.58□□□□□ -1.2
RFX1P22670 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RFX1P22670 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.58□□□□□ -1.2
RFX1P22670 PDCL3P5-201ENST00000398028 722 ntBASIC7.58□□□□□ -1.2
RFX1P22670 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms