Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NPM1P40-201ENST00000412758 733 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.18□□□□□ -1.58
XRCC1P18887 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.18□□□□□ -1.58
XRCC1P18887 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.18□□□□□ -1.58
XRCC1P18887 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 AC079168.1-201ENST00000458741 345 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.18□□□□□ -1.58
XRCC1P18887 OR5M14P-201ENST00000506803 618 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.18□□□□□ -1.58
XRCC1P18887 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.18□□□□□ -1.58
XRCC1P18887 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.18□□□□□ -1.58
XRCC1P18887 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.18□□□□□ -1.58
XRCC1P18887 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 AC025423.2-201ENST00000537570 439 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 AC127381.1-201ENST00000555979 939 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.18□□□□□ -1.58
XRCC1P18887 AC244107.2-201ENST00000611773 76 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 AC099654.6-201ENST00000636487 512 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 SMG1P7-201ENST00000565246 2704 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 AC133552.1-201ENST00000569988 4007 ntBASIC5.18□□□□□ -1.58
XRCC1P18887 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.17□□□□□ -1.58
XRCC1P18887 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 AL513548.1-201ENST00000562904 1724 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 AC093909.5-201ENST00000621839 1799 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
XRCC1P18887 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 RPL23P2-201ENST00000320371 421 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.17□□□□□ -1.58
XRCC1P18887 SNORA17.1-201ENST00000362945 126 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 SNORA70-201ENST00000384436 135 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 MIR105-1-201ENST00000385222 81 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 RN7SKP16-201ENST00000410180 299 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.17□□□□□ -1.58
XRCC1P18887 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.17□□□□□ -1.58
XRCC1P18887 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.17□□□□□ -1.58
XRCC1P18887 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.17□□□□□ -1.58
XRCC1P18887 Z92846.1-201ENST00000456203 268 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 SEPT14P1-201ENST00000458703 648 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 TRBV8-1-201ENST00000481590 279 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 AP000926.3-201ENST00000497201 299 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 AP001960.1-201ENST00000506494 658 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 AC068993.1-201ENST00000546724 589 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.17□□□□□ -1.58
XRCC1P18887 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.17□□□□□ -1.58
XRCC1P18887 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.17□□□□□ -1.58
XRCC1P18887 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.17□□□□□ -1.58
XRCC1P18887 AC009027.1-201ENST00000604510 479 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 MIR7155-201ENST00000615925 56 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 AC073869.10-201ENST00000642016 354 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
XRCC1P18887 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 AC000374.1-201ENST00000434698 1745 ntBASIC5.17□□□□□ -1.58
XRCC1P18887 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
XRCC1P18887 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 U8.4-201ENST00000363626 134 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 MIR765-201ENST00000390226 114 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 RPL23AP27-201ENST00000415161 451 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 MTND4LP12-201ENST00000448237 295 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 AC104634.1-201ENST00000452720 462 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 AC093827.1-201ENST00000480094 861 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 AL133372.1-201ENST00000493565 745 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms