Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 MIR3689C-201ENST00000581239 72 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC110743.1-201ENST00000584870 478 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC6.05□□□□□ -1.44
ATF4P18848 AL445223.1-201ENST00000595998 1051 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.05□□□□□ -1.44
ATF4P18848 AL589765.6-201ENST00000601909 549 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC027243.2-201ENST00000602530 724 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AP000403.1-201ENST00000603349 851 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL159169.3-201ENST00000608871 561 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC004839.1-201ENST00000610269 501 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL359535.1-201ENST00000612100 1087 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL589743.7-201ENST00000612637 233 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 AC012676.3-201ENST00000614983 479 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL121890.2-201ENST00000617644 465 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AL139089.1-201ENST00000620372 975 ntBASIC6.05□□□□□ -1.44
ATF4P18848 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 AC087893.2-201ENST00000623272 255 ntBASIC6.05□□□□□ -1.44
ATF4P18848 AC005618.4-201ENST00000625053 554 ntBASIC6.05□□□□□ -1.44
ATF4P18848 OR52B5P-202ENST00000641118 1110 ntBASIC6.05□□□□□ -1.44
ATF4P18848 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 PHKBP1-201ENST00000450951 1951 ntBASIC6.05□□□□□ -1.44
ATF4P18848 EEF1A1P2-201ENST00000553854 1447 ntBASIC6.05□□□□□ -1.44
ATF4P18848 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ATF4P18848 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ATF4P18848 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
ATF4P18848 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATF4P18848 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 GAPDHP24-201ENST00000328713 983 ntBASIC6.04□□□□□ -1.44
ATF4P18848 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 RNA5SP391-201ENST00000363456 119 ntBASIC6.04□□□□□ -1.44
ATF4P18848 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ATF4P18848 OR8V1P-201ENST00000395193 873 ntBASIC6.04□□□□□ -1.44
ATF4P18848 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC6.04□□□□□ -1.44
ATF4P18848 ZNF603P-201ENST00000405613 487 ntBASIC6.04□□□□□ -1.44
ATF4P18848 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 RN7SKP261-201ENST00000410948 278 ntBASIC6.04□□□□□ -1.44
ATF4P18848 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 RPS3AP9-201ENST00000417027 792 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.04□□□□□ -1.44
ATF4P18848 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 VN1R20P-201ENST00000425215 966 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AC108448.2-201ENST00000431546 730 ntBASIC6.04□□□□□ -1.44
ATF4P18848 NMNAT1P2-201ENST00000435192 860 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 TRBV26-201ENST00000456572 344 ntBASIC6.04□□□□□ -1.44
ATF4P18848 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 AC079193.1-201ENST00000460497 588 ntBASIC6.04□□□□□ -1.44
ATF4P18848 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 RPL9P33-201ENST00000484311 566 ntBASIC6.04□□□□□ -1.44
ATF4P18848 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 PFN1P8-201ENST00000497012 543 ntBASIC6.04□□□□□ -1.44
ATF4P18848 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 AC011352.1-201ENST00000512300 793 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 AC073581.1-201ENST00000519036 575 ntBASIC6.04□□□□□ -1.44
ATF4P18848 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 OR5G4P-201ENST00000525251 760 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AP000445.1-201ENST00000526692 741 ntBASIC6.04□□□□□ -1.44
ATF4P18848 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ATF4P18848 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.04□□□□□ -1.44
ATF4P18848 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.04□□□□□ -1.44
ATF4P18848 AC144548.1-201ENST00000549577 324 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.04□□□□□ -1.44
ATF4P18848 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.04□□□□□ -1.44
ATF4P18848 OR11J2P-201ENST00000555298 907 ntBASIC6.04□□□□□ -1.44
ATF4P18848 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms