Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 RPL17P35-201ENST00000432217 549 ntBASIC5.3□□□□□ -1.56
LDLRP01130 AC012075.1-201ENST00000436549 580 ntBASIC5.3□□□□□ -1.56
LDLRP01130 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.3□□□□□ -1.56
LDLRP01130 TCEA1P3-201ENST00000443005 880 ntBASIC5.3□□□□□ -1.56
LDLRP01130 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.3□□□□□ -1.56
LDLRP01130 AC005532.2-201ENST00000467154 373 ntBASIC5.3□□□□□ -1.56
LDLRP01130 RN7SL188P-201ENST00000469842 285 ntBASIC5.3□□□□□ -1.56
LDLRP01130 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 AC008953.1-201ENST00000497334 318 ntBASIC5.3□□□□□ -1.56
LDLRP01130 AK4P6-201ENST00000505168 528 ntBASIC5.3□□□□□ -1.56
LDLRP01130 RNU6-319P-201ENST00000516025 108 ntBASIC5.3□□□□□ -1.56
LDLRP01130 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.3□□□□□ -1.56
LDLRP01130 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.3□□□□□ -1.56
LDLRP01130 AC004825.1-201ENST00000555068 586 ntBASIC5.3□□□□□ -1.56
LDLRP01130 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 AC090079.2-201ENST00000575289 768 ntBASIC5.3□□□□□ -1.56
LDLRP01130 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.3□□□□□ -1.56
LDLRP01130 RPSAP73-201ENST00000614820 330 ntBASIC5.3□□□□□ -1.56
LDLRP01130 AL356490.1-201ENST00000623079 479 ntBASIC5.3□□□□□ -1.56
LDLRP01130 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LDLRP01130 AC020978.9-201ENST00000624380 1141 ntBASIC5.3□□□□□ -1.56
LDLRP01130 AC080188.3-201ENST00000624842 748 ntBASIC5.3□□□□□ -1.56
LDLRP01130 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 OR11H2-202ENST00000641517 1085 ntBASIC5.3□□□□□ -1.56
LDLRP01130 CASC19-264ENST00000641912 1184 ntBASIC5.3□□□□□ -1.56
LDLRP01130 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LDLRP01130 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.3□□□□□ -1.56
LDLRP01130 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDLRP01130 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 AC093849.1-201ENST00000563631 2209 ntBASIC5.29□□□□□ -1.56
LDLRP01130 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 CASC19-248ENST00000641674 1356 ntBASIC5.29□□□□□ -1.56
LDLRP01130 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 AC018809.2-201ENST00000602436 3823 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.29□□□□□ -1.56
LDLRP01130 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 AC245100.2-201ENST00000454544 1679 ntBASIC5.29□□□□□ -1.56
LDLRP01130 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.29□□□□□ -1.56
LDLRP01130 RNA5SP507-201ENST00000363603 121 ntBASIC5.29□□□□□ -1.56
LDLRP01130 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 MIR130A-201ENST00000385274 89 ntBASIC5.29□□□□□ -1.56
LDLRP01130 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LDLRP01130 OR6E1P-201ENST00000414424 923 ntBASIC5.29□□□□□ -1.56
LDLRP01130 RPL23AP27-201ENST00000415161 451 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AL357078.2-201ENST00000416486 427 ntBASIC5.29□□□□□ -1.56
LDLRP01130 RPA2P2-201ENST00000419698 796 ntBASIC5.29□□□□□ -1.56
LDLRP01130 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.29□□□□□ -1.56
LDLRP01130 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.29□□□□□ -1.56
LDLRP01130 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.29□□□□□ -1.56
LDLRP01130 AP000949.1-201ENST00000438328 629 ntBASIC5.29□□□□□ -1.56
LDLRP01130 RPL12P3-201ENST00000440080 396 ntBASIC5.29□□□□□ -1.56
LDLRP01130 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 EEF1B2P5-201ENST00000444820 548 ntBASIC5.29□□□□□ -1.56
LDLRP01130 GAPDHP14-201ENST00000450472 937 ntBASIC5.29□□□□□ -1.56
LDLRP01130 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.29□□□□□ -1.56
LDLRP01130 OR52E3P-201ENST00000452083 936 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 RPS23P6-201ENST00000466136 431 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC004453.1-201ENST00000487895 408 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AL049874.2-201ENST00000492636 288 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms