Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 MTCYBP27-201ENST00000555160 670 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC005951.1-201ENST00000576706 485 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 AL359513.1-201ENST00000614364 557 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 AC024023.1-201ENST00000624530 922 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM38O00635 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM38O00635 PARP4P2-201ENST00000446672 3326 ntBASIC5.82□□□□□ -1.48
TRIM38O00635 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM38O00635 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
TRIM38O00635 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM38O00635 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM38O00635 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM38O00635 AC117409.1-201ENST00000470499 1310 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
TRIM38O00635 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 OR10R3P-201ENST00000361688 942 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 SNORA64.1-201ENST00000362600 132 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 HMGB1P20-201ENST00000402555 677 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AL136131.1-201ENST00000406079 803 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 METTL15P3-201ENST00000415522 1221 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC127526.2-201ENST00000426436 775 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 MTCO1P43-201ENST00000431831 488 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AL035458.1-201ENST00000433096 585 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 AC069540.1-201ENST00000446320 988 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 CYCSP42-201ENST00000450823 238 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 RPL23AP40-201ENST00000487630 390 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 RN7SL466P-201ENST00000497546 295 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 NAMPTP2-201ENST00000505629 1115 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 AC138866.2-201ENST00000508650 584 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 RNU6-1004P-201ENST00000516584 111 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 SNORA31.13-201ENST00000516624 135 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 GLRXP2-201ENST00000555594 321 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AL121594.4-201ENST00000556211 1196 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 AC122134.1-201ENST00000565664 1104 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM38O00635 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM38O00635 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 AC068620.3-201ENST00000602749 560 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC096947.1-201ENST00000603233 470 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 FO393422.1-201ENST00000603908 708 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC090912.3-201ENST00000609775 533 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC006386.1-201ENST00000619436 415 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC007275.1-201ENST00000621243 671 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 AC021106.3-201ENST00000623925 531 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM38O00635 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 AC068870.3-201ENST00000625077 2536 ntBASIC5.81□□□□□ -1.48
TRIM38O00635 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM38O00635 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM38O00635 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM38O00635 HSPD1P11-201ENST00000508643 1702 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms