Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 RN7SKP185-201ENST00000362813 326 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 RN7SKP103-201ENST00000363848 320 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 RNA5SP455-201ENST00000365190 119 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 SNORA51.8-201ENST00000384234 132 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 RNU6-883P-201ENST00000384597 107 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL589655.1-201ENST00000405398 482 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL358178.1-201ENST00000407698 397 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 RN7SKP17-201ENST00000411242 351 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC124944.2-201ENST00000429866 1242 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 TRY2P-201ENST00000448860 689 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 GOLGA5P1-201ENST00000507317 980 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 NPM1P52-201ENST00000518264 846 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 OR8K2P-201ENST00000524645 927 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 OR8Q1P-201ENST00000526467 655 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC012414.2-201ENST00000559474 187 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL583832.1-201ENST00000603227 784 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC005972.3-201ENST00000606304 481 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 FAM25E-202ENST00000608562 189 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL627230.1-201ENST00000613077 211 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL591926.8-201ENST00000616876 211 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AL162233.1-201ENST00000620014 944 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC005618.4-201ENST00000625053 554 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 INTS6P1-201ENST00000504674 2530 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 AC079298.1-201ENST00000625026 1619 ntBASIC5.48□□□□□ -1.53
YIPF1Q9Y548 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
YIPF1Q9Y548 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 Z95114.1-201ENST00000624264 14574 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 NXF4-202ENST00000416098 1465 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 MTND4P21-201ENST00000453886 1357 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 OR8V1P-201ENST00000395193 873 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AL078599.1-201ENST00000402075 293 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 GJA6P-201ENST00000415117 1042 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AL392003.1-201ENST00000434394 243 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 RHOT1P3-201ENST00000436571 331 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 MORF4L1P4-201ENST00000450245 976 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 RPS3AP41-201ENST00000462701 778 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC083982.1-201ENST00000485679 344 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 IGBP1P4-201ENST00000503202 879 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC006427.1-201ENST00000514359 712 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 RN7SKP260-201ENST00000516907 149 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC005000.1-201ENST00000536192 288 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 MIR4691-201ENST00000583764 85 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AL162431.4-201ENST00000604674 411 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC005014.3-201ENST00000605985 190 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC091953.3-201ENST00000623220 236 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC073342.3-201ENST00000624211 193 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 AC106730.3-201ENST00000624568 641 ntBASIC5.47□□□□□ -1.53
YIPF1Q9Y548 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YIPF1Q9Y548 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms