Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC016180.1-201ENST00000567945 403 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC013244.1-201ENST00000604279 193 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC018690.1-201ENST00000608144 626 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 EIF3FP1-201ENST00000613970 806 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 MUC2-202ENST00000613187 4845 ntBASIC5.33□□□□□ -1.56
CISHQ9NSE2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CISHQ9NSE2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CISHQ9NSE2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CISHQ9NSE2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CISHQ9NSE2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CISHQ9NSE2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 CHMP1B2P-201ENST00000399581 597 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 Z97832.1-201ENST00000402490 328 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 AL358178.1-201ENST00000407698 397 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 AC007738.1-201ENST00000413892 348 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 AF186996.5-201ENST00000418098 904 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CISHQ9NSE2 CEACAMP7-201ENST00000444105 496 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 AC105031.1-201ENST00000518550 476 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 AL359219.2-201ENST00000555184 348 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 AGGF1P9-201ENST00000561884 913 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 AC009120.7-201ENST00000623452 780 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CISHQ9NSE2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CISHQ9NSE2 ECM1P2-201ENST00000503354 1577 ntBASIC5.32□□□□□ -1.56
CISHQ9NSE2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CISHQ9NSE2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CISHQ9NSE2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CISHQ9NSE2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CISHQ9NSE2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CISHQ9NSE2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 SNORA73.1-201ENST00000363107 205 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 SNORA70-201ENST00000384436 135 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 QRSL1P2-201ENST00000418582 964 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 RBMY2QP-201ENST00000429799 1147 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 RPL35AP21-201ENST00000437667 333 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 PTMAP6-201ENST00000439110 327 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 SCAND3P1-201ENST00000439854 1060 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 RN7SL319P-201ENST00000480656 221 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC004453.1-201ENST00000487895 408 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC073073.1-201ENST00000493920 463 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 MRPS33P2-201ENST00000507850 322 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC110775.1-201ENST00000513721 462 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 OR5D2P-201ENST00000524390 911 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC044860.2-201ENST00000561005 179 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 NPM1P45-201ENST00000583151 559 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AL049794.2-201ENST00000616301 365 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC087821.1-201ENST00000623639 567 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC068446.1-201ENST00000556425 1549 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.31□□□□□ -1.56
CISHQ9NSE2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.31□□□□□ -1.56
CISHQ9NSE2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CISHQ9NSE2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CISHQ9NSE2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms