Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VTA1Q9NP79 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VTA1Q9NP79 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC006511.3-201ENST00000624929 1783 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 GAPDHP24-201ENST00000328713 983 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AL672167.2-201ENST00000377164 879 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 RPS17P17-201ENST00000419392 409 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 PTP4A1P1-201ENST00000420539 515 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC005189.1-201ENST00000431286 310 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC245047.2-201ENST00000441060 530 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC008280.2-201ENST00000455473 307 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 RNU1-88P-201ENST00000459274 128 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC098583.1-201ENST00000480875 255 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 BOLA3P3-201ENST00000505182 232 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 SNORA31.13-201ENST00000516624 135 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC008429.4-201ENST00000521201 182 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AL450336.1-201ENST00000605180 586 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AL365400.2-201ENST00000605604 902 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AL035461.2-201ENST00000619201 524 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC068057.2-201ENST00000624047 895 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.5□□□□□ -1.37
VTA1Q9NP79 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VTA1Q9NP79 AC117409.1-201ENST00000470499 1310 ntBASIC6.5□□□□□ -1.37
VTA1Q9NP79 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 CASC19-281ENST00000642118 1554 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 NXF4-202ENST00000416098 1465 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 RNU4-7P-201ENST00000364758 141 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AP000534.2-201ENST00000412729 568 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 USP9YP21-201ENST00000420603 432 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 PRUNEP1-201ENST00000425846 705 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC093716.1-201ENST00000435923 377 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 VN1R25P-201ENST00000443385 738 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AL096803.2-201ENST00000450032 677 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 RPL6P9-201ENST00000466502 859 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 RPL35AP19-201ENST00000469425 329 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC100832.1-201ENST00000471945 383 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 RN7SL583P-201ENST00000475692 287 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC073610.1-201ENST00000489971 396 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 RN7SL547P-201ENST00000490793 290 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 AL035690.1-201ENST00000490892 383 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 RPL21P131-201ENST00000497298 483 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC013701.1-201ENST00000522657 465 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 NIFKP6-201ENST00000598115 845 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 ELOCP35-201ENST00000604289 336 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC018618.2-201ENST00000604770 446 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 RNU4-5P-201ENST00000607255 135 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms