Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC130304.1-201ENST00000622942 2385 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 RNA5SP279-201ENST00000365513 117 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 RNU6-932P-201ENST00000391108 106 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC092638.1-201ENST00000411966 1275 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 LUZP4P1-201ENST00000415420 344 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC009518.2-201ENST00000418056 731 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 MTND2P18-201ENST00000419962 1030 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC023128.2-201ENST00000420880 1223 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 BX119904.4-201ENST00000424402 301 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 GAPDHP59-201ENST00000435908 267 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 MTND2P40-201ENST00000436718 841 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 PTGES3P1-201ENST00000439531 483 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 FRG2FP-204ENST00000453982 852 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 RPL12P39-201ENST00000455456 496 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 GTF2IP12-201ENST00000456547 356 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 RPL7P32-201ENST00000457119 744 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC002075.1-201ENST00000457396 676 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 BET1P1-201ENST00000482276 359 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 PSMA2P2-201ENST00000504319 686 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC090958.1-201ENST00000511122 351 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 HSD3BP3-201ENST00000514706 994 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 SNORA3.4-201ENST00000515969 96 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 RNA5SP303-201ENST00000516192 130 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 RNA5SP441-201ENST00000516809 88 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 MTCYBP19-201ENST00000517463 1124 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC006115.2-201ENST00000596823 202 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC010620.1-201ENST00000601088 1102 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 SMIM12P1-201ENST00000603004 274 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AL022161.1-201ENST00000604390 213 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC067838.1-201ENST00000606064 577 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AL135999.3-201ENST00000610501 812 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC092106.3-201ENST00000611308 722 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC009090.3-201ENST00000616553 565 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC010975.3-201ENST00000618727 978 ntBASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 Z95114.1-201ENST00000624264 14574 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC017079.1-201ENST00000333650 415 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 RNU6-224P-201ENST00000384055 107 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 CHMP1B2P-201ENST00000399581 597 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 YWHAZP6-201ENST00000399764 738 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC233289.1-201ENST00000403700 508 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL096829.1-201ENST00000413677 457 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AL035422.1-201ENST00000414193 397 ntBASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.55□□□□□ -1.52
AMBRA1Q9C0C7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 523.3 ms