Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC241377.1-201ENST00000619797 406 ntBASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.15□□□□□ -1.42
UPF3BQ9BZI7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
UPF3BQ9BZI7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 MIR765-201ENST00000390226 114 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AL035079.1-201ENST00000405210 287 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 RAB28P1-201ENST00000411517 641 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 RPL35AP28-201ENST00000459730 331 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 RPS21P4-201ENST00000487122 248 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 RN7SL808P-201ENST00000496066 299 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC093890.1-201ENST00000502554 540 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 ASNSP4-201ENST00000511103 447 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 MIR3691-201ENST00000578066 90 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC069307.1-201ENST00000602820 447 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AP005131.7-201ENST00000610087 611 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AC100827.5-201ENST00000615883 426 ntBASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
UPF3BQ9BZI7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AC020633.1-201ENST00000468439 2247 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 U3.2-201ENST00000362981 210 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 OR8V1P-201ENST00000395193 873 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 HMGB1P32-201ENST00000425971 565 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AL161722.2-201ENST00000434731 981 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 RPS29P10-201ENST00000439197 166 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 TCEA1P3-201ENST00000443005 880 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AC022832.1-201ENST00000530718 645 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 MIR6810-201ENST00000622701 70 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AC097063.1-201ENST00000426714 1797 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AC100778.3-201ENST00000580060 1750 ntBASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.13□□□□□ -1.43
UPF3BQ9BZI7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AL589647.1-201ENST00000402485 466 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 RN7SKP273-201ENST00000411392 314 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 PCNPP4-201ENST00000414817 517 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 EIF2S2P3-201ENST00000428356 999 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 AC009238.2-201ENST00000431026 355 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 RPL7L1P9-201ENST00000431298 745 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 RPS11P7-201ENST00000442125 465 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 GYG1P1-201ENST00000460864 698 ntBASIC6.12□□□□□ -1.43
UPF3BQ9BZI7 RPS4XP1-201ENST00000482189 787 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms