Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RSPO3Q9BXY4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RSPO3Q9BXY4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RSPO3Q9BXY4 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
RSPO3Q9BXY4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 HSPA8P14-201ENST00000552265 1805 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AL031595.2-201ENST00000624215 19071 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC073429.2-201ENST00000569694 1444 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 RN7SKP162-201ENST00000363605 345 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 SNORA74A-201ENST00000364089 198 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 SNORA67-201ENST00000384423 137 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 DUTP5-201ENST00000406790 469 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 SNORA77-201ENST00000408716 125 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 QRSL1P2-201ENST00000418582 964 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AL355433.1-201ENST00000422804 300 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 RHOT1P3-201ENST00000436571 331 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 CYCSP24-201ENST00000445119 316 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC009127.1-201ENST00000467090 155 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC073073.1-201ENST00000493920 463 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC108693.1-201ENST00000496068 432 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 BX510359.5-201ENST00000515651 304 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 RNA5SP392-201ENST00000516905 112 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC012339.2-201ENST00000523996 453 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC079395.2-201ENST00000610982 737 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AC018445.2-201ENST00000622987 260 ntBASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RSPO3Q9BXY4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AL360270.2-201ENST00000562952 5985 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 RNU1-43P-201ENST00000365052 165 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 ATP5HP3-201ENST00000396994 486 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 LRRC37BP1-201ENST00000398851 714 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 PCNPP4-201ENST00000414817 517 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 RPL34P20-201ENST00000442771 351 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 RN7SL799P-201ENST00000475891 298 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 RNU6-84P-201ENST00000607737 102 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AC015660.5-201ENST00000623238 564 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AC068446.1-201ENST00000556425 1549 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 AL603750.1-201ENST00000624216 1717 ntBASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO3Q9BXY4 TCP11X1-202ENST00000622971 1372 ntBASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 CDY3P-201ENST00000454543 1618 ntBASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.65□□□□□ -1.66
RSPO3Q9BXY4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO3Q9BXY4 MIR600-201ENST00000385007 98 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms