Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 RNU1-146P-201ENST00000364015 165 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 RPL10P10-201ENST00000403509 664 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 RN7SKP199-201ENST00000410325 305 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AL158827.1-201ENST00000416300 391 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP4Q99569 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 RPL5P2-201ENST00000429598 854 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 MTCO1P57-201ENST00000432182 261 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AC012075.1-201ENST00000436549 580 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 ARL5AP3-201ENST00000439327 386 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AL359265.1-201ENST00000440296 795 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 AL353718.1-201ENST00000451028 517 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 RPL7P51-201ENST00000490532 749 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 AC091912.1-201ENST00000511351 248 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP4Q99569 RN7SKP99-201ENST00000517028 307 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP4Q99569 OR7E10P-201ENST00000526420 991 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AP002373.2-201ENST00000541631 1060 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AC015720.2-201ENST00000567709 334 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 SNORD95-201ENST00000579879 68 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.33□□□□□ -1.56
PKP4Q99569 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 AP000769.2-201ENST00000602344 396 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AC006363.1-201ENST00000603806 463 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.33□□□□□ -1.56
PKP4Q99569 AC090772.4-201ENST00000623599 362 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.33□□□□□ -1.56
PKP4Q99569 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 AC073869.8-201ENST00000641806 335 ntBASIC5.33□□□□□ -1.56
PKP4Q99569 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.33□□□□□ -1.56
PKP4Q99569 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.33□□□□□ -1.56
PKP4Q99569 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.33□□□□□ -1.56
PKP4Q99569 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKP4Q99569 HSPA8P14-201ENST00000552265 1805 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 GVINP1-202ENST00000531871 7271 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PKP4Q99569 MTND4P9-201ENST00000507819 1346 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP4Q99569 RNU6-618P-201ENST00000363518 112 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 RN7SKP124-201ENST00000364730 341 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 MIR620-201ENST00000385232 95 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 RNU6-564P-201ENST00000410983 104 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP4Q99569 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.32□□□□□ -1.56
PKP4Q99569 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.32□□□□□ -1.56
PKP4Q99569 MTCO1P45-201ENST00000431457 267 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP4Q99569 MTND2P40-201ENST00000436718 841 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.32□□□□□ -1.56
PKP4Q99569 AL157884.3-201ENST00000448273 1184 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 BUD31P2-201ENST00000449374 300 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AC069277.2-201ENST00000454211 432 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 RANP1-206ENST00000455094 651 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AL133244.1-201ENST00000456007 258 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AC023141.9-201ENST00000458734 412 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 RN7SL717P-201ENST00000478343 297 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 RPL7AP10-201ENST00000481016 791 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AC104109.1-201ENST00000498563 436 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 HAUS1P1-201ENST00000505275 832 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.32□□□□□ -1.56
PKP4Q99569 AC010374.2-201ENST00000512933 535 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 FTH1P11-201ENST00000517577 551 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AP003102.1-201ENST00000525638 661 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 MTND5P21-201ENST00000531961 522 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.32□□□□□ -1.56
PKP4Q99569 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.32□□□□□ -1.56
PKP4Q99569 OR8X1P-201ENST00000534542 869 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PKP4Q99569 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.32□□□□□ -1.56
PKP4Q99569 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKP4Q99569 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.32□□□□□ -1.56
PKP4Q99569 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.32□□□□□ -1.56
PKP4Q99569 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.32□□□□□ -1.56
PKP4Q99569 AC068313.1-201ENST00000604028 1008 ntBASIC5.32□□□□□ -1.56
PKP4Q99569 AC135803.1-201ENST00000608748 565 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms