Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 OR8Q1P-201ENST00000526467 655 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC087894.1-201ENST00000538359 518 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AL358913.1-201ENST00000554342 121 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AL049838.1-201ENST00000563647 981 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 MIR4311-201ENST00000580794 100 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 CBX3P2-202ENST00000583365 535 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC010487.1-201ENST00000594408 1172 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 SNX6P1-201ENST00000601728 1224 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC097520.1-201ENST00000624435 385 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC104964.3-201ENST00000606115 2860 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.34□□□□□ -1.4
CDK5RAP3Q96JB5 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CDK5RAP3Q96JB5 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CDK5RAP3Q96JB5 AC114774.1-201ENST00000507410 1770 ntBASIC6.34□□□□□ -1.4
CDK5RAP3Q96JB5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
CDK5RAP3Q96JB5 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC144833.1-201ENST00000567953 4089 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL627171.1-201ENST00000618845 1308 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 RNA5SP394-201ENST00000364216 119 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 HYALP1-201ENST00000417674 1279 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC106883.1-201ENST00000418805 562 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL160175.1-201ENST00000428124 247 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 LRRC37A14P-201ENST00000452297 462 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 RPS3AP53-201ENST00000454716 778 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 MRE11P1-201ENST00000464884 2127 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 CYCSP20-201ENST00000473154 315 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 CYCSP22-201ENST00000517555 339 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC136777.2-201ENST00000522979 358 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 MRPS16P1-201ENST00000523462 412 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 OR7E13P-201ENST00000526052 910 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 HSPE1P2-201ENST00000554777 306 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AGGF1P9-201ENST00000561884 913 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC008507.2-201ENST00000588402 1176 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC112503.1-201ENST00000608436 391 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 MIR193BHG-214ENST00000641765 509 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 OR4F13P-202ENST00000560066 2054 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 AC123769.1-201ENST00000530992 3192 ntBASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP3Q96JB5 HSPD1P14-201ENST00000432666 1618 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 NLRP3P1-201ENST00000622303 1785 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 AC093671.1-201ENST00000624981 2929 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 RNU6-354P-201ENST00000383862 107 ntBASIC6.32□□□□□ -1.4
CDK5RAP3Q96JB5 RNU6-610P-201ENST00000384264 107 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms