Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 MTND4P8-201ENST00000514997 1362 ntBASIC5.42□□□□□ -1.54
CTHRC1Q96CG8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AL442128.2-201ENST00000620246 1824 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AL158152.1-201ENST00000602652 1435 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 KRR1P1-201ENST00000419430 803 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AL365338.1-201ENST00000422282 858 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 NAP1L4P2-201ENST00000425958 899 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 VN1R21P-201ENST00000426703 765 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 FO393419.3-201ENST00000428741 282 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC093716.1-201ENST00000435923 377 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 SEPT14P24-201ENST00000447236 180 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 MRPL35P2-201ENST00000448009 511 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 HLA-DPA3-207ENST00000454398 229 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 SNRPCP3-201ENST00000474888 476 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC087672.1-201ENST00000479876 766 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC105384.2-201ENST00000508433 640 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 RNA5SP271-201ENST00000516700 88 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC087897.1-201ENST00000550134 156 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 SNORD39.2-201ENST00000579995 76 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC027243.2-201ENST00000602530 724 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC005377.1-201ENST00000605126 456 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 RPL12P48-201ENST00000605620 304 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC024060.1-201ENST00000607052 494 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AC093783.1-201ENST00000612976 329 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AP001962.1-201ENST00000624114 559 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AL161912.4-201ENST00000623889 2468 ntBASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTHRC1Q96CG8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC023490.2-201ENST00000359859 470 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 RNU6-932P-201ENST00000391108 106 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC023128.2-201ENST00000420880 1223 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 RPS4XP16-201ENST00000427198 791 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 BX323845.3-201ENST00000428215 527 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 RPS29P14-201ENST00000431518 171 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AL389925.1-201ENST00000432257 728 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms