Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ERCC4Q92889 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 PARP4P2-201ENST00000446672 3326 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC4Q92889 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 SELENOWP1-201ENST00000322792 252 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 RNA5SP232-201ENST00000364144 119 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 MIR130B-202ENST00000385018 82 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 GSTA12P-201ENST00000402398 508 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC4Q92889 GLUD1P9-201ENST00000420997 1173 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 USP9YP11-201ENST00000427537 717 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC093422.3-201ENST00000428506 305 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC4Q92889 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC4Q92889 MTND6P5-201ENST00000448266 512 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC118758.1-202ENST00000454719 225 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 CTSLP6-201ENST00000458273 1002 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ERCC4Q92889 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC4Q92889 AC105420.1-201ENST00000504389 582 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC4Q92889 Y_RNA.688-201ENST00000516565 95 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC4Q92889 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.56□□□□□ -1.36
ERCC4Q92889 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.56□□□□□ -1.36
ERCC4Q92889 AGGF1P6-201ENST00000569213 976 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ERCC4Q92889 AC006115.2-201ENST00000596823 202 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC025588.2-201ENST00000604851 466 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC092681.3-201ENST00000609463 678 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC245100.7-201ENST00000609678 442 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.56□□□□□ -1.36
ERCC4Q92889 MIR6721-201ENST00000617181 87 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AL136228.1-201ENST00000622221 319 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC4Q92889 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ERCC4Q92889 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC4Q92889 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.56□□□□□ -1.36
ERCC4Q92889 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC4Q92889 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.56□□□□□ -1.36
ERCC4Q92889 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 PROS2P-201ENST00000474651 1951 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC4Q92889 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC4Q92889 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC4Q92889 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC4Q92889 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ERCC4Q92889 SNORD56.4-201ENST00000363883 71 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ERCC4Q92889 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ERCC4Q92889 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC087752.1-201ENST00000391360 558 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 GCNT1P4-201ENST00000404096 329 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.55□□□□□ -1.36
ERCC4Q92889 BX276092.6-201ENST00000430476 250 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 VN1R108P-201ENST00000431580 830 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AC096775.1-201ENST00000437724 448 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC093166.3-201ENST00000448785 303 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 RPS23P9-201ENST00000448848 438 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 NPM1P19-201ENST00000450070 712 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC4Q92889 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC4Q92889 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 BX276092.8-201ENST00000455722 250 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AC093752.1-206ENST00000511823 336 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 MAST4-IT1-201ENST00000514241 658 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 RNA5SP473-201ENST00000516402 125 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC125611.1-201ENST00000549563 229 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC021483.2-201ENST00000567415 758 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ERCC4Q92889 AC021171.1-201ENST00000603137 706 ntBASIC6.55□□□□□ -1.36
ERCC4Q92889 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC4Q92889 Z94722.1-201ENST00000604328 474 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms