Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL121612.2-201ENST00000612261 482 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC091046.2-201ENST00000620775 665 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.68□□□□□ -1.5
HMGB4Q8WW32 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB4Q8WW32 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC087516.1-201ENST00000561236 2428 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL138820.1-201ENST00000617901 5305 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 RNU4-7P-201ENST00000364758 141 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 MIR130A-201ENST00000385274 89 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL645927.1-201ENST00000396783 406 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 CHMP1B2P-201ENST00000399581 597 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 XKRYP4-201ENST00000414395 483 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 RPL23AP27-201ENST00000415161 451 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC234781.4-201ENST00000419384 244 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL133325.1-201ENST00000421090 382 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 MTCYBP12-201ENST00000440559 1134 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 RPS27P5-201ENST00000444247 244 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 XKRYP5-201ENST00000449659 483 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL355032.1-201ENST00000472981 438 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 RN7SKP248-201ENST00000516278 305 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 CIR1P1-201ENST00000524055 1133 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 HMGN2P6-201ENST00000551091 273 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 YWHAZP1-201ENST00000556286 722 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 CD24P2-201ENST00000565486 219 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC090666.1-201ENST00000578241 445 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 MIR4700-201ENST00000578311 74 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL445222.1-201ENST00000607259 628 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC027449.1-201ENST00000608890 407 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AL118522.2-201ENST00000616045 615 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC021422.1-201ENST00000621212 473 ntBASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HMGB4Q8WW32 AC007342.7-201ENST00000624610 2337 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC093297.3-201ENST00000607056 2517 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 ATP5HP3-201ENST00000396994 486 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 RN7SKP273-201ENST00000411392 314 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 HYALP1-201ENST00000417674 1279 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 MTCYBP32-201ENST00000427945 1084 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AC096775.1-201ENST00000437724 448 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 FAR2P1-206ENST00000449736 709 ntBASIC5.66□□□□□ -1.5
HMGB4Q8WW32 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGB4Q8WW32 OTX2P1-201ENST00000450956 354 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms