Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 RNA5SP223-201ENST00000365174 120 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 MIR765-201ENST00000390226 114 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 NPM1P38-201ENST00000403835 865 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 SPTLC1P2-201ENST00000407089 121 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC020779.1-201ENST00000478757 796 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC090114.3-201ENST00000479267 829 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC147055.1-201ENST00000509261 750 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 EIF1AXP2-201ENST00000555940 413 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC006116.3-201ENST00000592968 361 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 VN1R81P-201ENST00000602085 372 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AC138473.1-201ENST00000605717 526 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 AP005432.2-201ENST00000608162 586 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 RPSAP73-201ENST00000614820 330 ntBASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
C9orf40Q8IXQ3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 RN7SKP74-201ENST00000362849 309 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 RNA5SP507-201ENST00000363603 121 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 MGAT2P2-201ENST00000427194 797 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 ASNSP4-201ENST00000511103 447 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 RNU6-751P-201ENST00000516382 101 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 RNU6-551P-201ENST00000516661 103 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC027369.5-201ENST00000533838 755 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC068993.1-201ENST00000546724 589 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC011447.4-201ENST00000587562 111 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 BNIP3P35-201ENST00000604530 490 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AC015660.5-201ENST00000623238 564 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 LINC01739-205ENST00000641890 573 ntBASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
C9orf40Q8IXQ3 AL138820.1-201ENST00000617901 5305 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 MTCO1P8-201ENST00000416914 1523 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 SNURFL-201ENST00000309296 343 ntBASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
C9orf40Q8IXQ3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms