Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC092681.3-201ENST00000609463 678 ntBASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 AL158063.1-201ENST00000615349 536 ntBASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 MIR6071-201ENST00000616741 78 ntBASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 VN1R7P-201ENST00000619242 903 ntBASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM48Q8IWZ4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 MTND5P29-201ENST00000458676 1807 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC105235.1-201ENST00000623208 1816 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 KARSP3-201ENST00000571212 1504 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 RNA5SP478-201ENST00000364657 115 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AL157702.1-201ENST00000398764 426 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 RPL23AP59-201ENST00000399415 461 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AL079342.2-201ENST00000403367 482 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC124944.2-201ENST00000429866 1242 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 PSMD10P2-201ENST00000432890 672 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 VPS25P1-201ENST00000455691 508 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC011979.1-201ENST00000472300 483 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 RN7SL326P-201ENST00000477493 296 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 RPL12P31-201ENST00000478433 450 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC010424.1-201ENST00000506336 297 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 HSD3BP3-201ENST00000514706 994 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AP001804.1-201ENST00000526868 919 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC009120.3-201ENST00000563335 499 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC078795.2-201ENST00000602835 1252 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC011374.2-201ENST00000607135 526 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC092653.1-201ENST00000608509 531 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 FRG1HP-204ENST00000617940 757 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC092656.1-203ENST00000624134 423 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 FP325313.1-201ENST00000638228 703 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AL137141.1-201ENST00000624622 4836 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AC073055.1-201ENST00000456901 1621 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 AL049634.1-201ENST00000453770 1720 ntBASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM48Q8IWZ4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms