Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 U3.36-201ENST00000408418 213 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 PTP4A1P3-201ENST00000433661 420 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AZGP1P2-201ENST00000454506 345 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 DUTP1-201ENST00000493631 470 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 CEACAMP10-202ENST00000495431 496 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 OSBPL9P3-201ENST00000534523 595 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC092451.2-201ENST00000538746 658 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 GSTP1P1-201ENST00000548078 319 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC106730.2-201ENST00000566641 540 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC135178.6-201ENST00000605314 398 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 NLRP3P1-201ENST00000622303 1785 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AL359955.1-201ENST00000455242 3275 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AL035419.1-201ENST00000397037 564 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 RPL26P37-201ENST00000411983 438 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 FAR2P2-201ENST00000413041 594 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 FAR2P4-202ENST00000425399 584 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AL590399.4-201ENST00000436561 601 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC096775.1-201ENST00000437724 448 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 SDR42E1P3-201ENST00000438345 502 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 RPS11P7-201ENST00000442125 465 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC079080.1-201ENST00000479841 822 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC093890.1-201ENST00000502554 540 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC016550.1-201ENST00000505348 785 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 SNORA76.2-201ENST00000517095 137 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 NOP56P3-201ENST00000549457 385 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 MIR4311-201ENST00000580794 100 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC084373.1-201ENST00000603311 235 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 FAM25E-202ENST00000608562 189 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC006213.4-201ENST00000616184 634 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 PWAR1-201ENST00000624188 2414 ntBASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.01□□□□□ -1.45
HERC6Q8IVU3 AL355834.1-201ENST00000556602 3965 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HERC6Q8IVU3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6□□□□□ -1.45
HERC6Q8IVU3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HERC6Q8IVU3 SPATA2P1-201ENST00000431223 2055 ntBASIC6□□□□□ -1.45
HERC6Q8IVU3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms