Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL731532.2-201ENST00000623542 1953 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 AP001642.1-201ENST00000624727 2117 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAB43Q86YS6 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 NACAP7-201ENST00000407371 609 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 RN7SKP126-201ENST00000411143 300 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAB43Q86YS6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 Z92846.1-201ENST00000456203 268 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 RNA5SP103-201ENST00000459503 118 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 CBX1P5-201ENST00000475330 559 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 RPS17P5-201ENST00000498293 408 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 MYL12BP2-201ENST00000503948 512 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 RPS4XP20-201ENST00000505751 772 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 EIF3KP3-201ENST00000514461 639 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 AC116651.1-201ENST00000609724 556 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 AC091932.2-201ENST00000623014 291 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAB43Q86YS6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 AC112255.1-201ENST00000624070 2493 ntBASIC5.02□□□□□ -1.61
RAB43Q86YS6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAB43Q86YS6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RAB43Q86YS6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RAB43Q86YS6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC068870.1-201ENST00000563737 2455 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 RNU1-106P-201ENST00000384382 164 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 MIR550A3-201ENST00000390735 95 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 RNA5SP241-201ENST00000391326 114 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 RN7SKP97-201ENST00000410966 333 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC093162.1-201ENST00000419682 124 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 OTX2P1-201ENST00000450956 354 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 TAAR4P-201ENST00000454843 1039 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC245028.2-201ENST00000458673 253 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 NDUFB5P1-201ENST00000508134 564 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 GTF2F2P1-201ENST00000511083 675 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AP004607.2-201ENST00000533949 322 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 YWHABP2-201ENST00000540201 713 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC092490.3-201ENST00000545370 572 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC105036.1-201ENST00000566222 271 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 RN7SL290P-201ENST00000578661 300 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AP002884.5-201ENST00000595053 1132 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC005252.1-201ENST00000604518 1063 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC024940.4-201ENST00000605507 246 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AL136295.6-201ENST00000610486 658 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AL353796.1-201ENST00000561542 3241 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 AL731566.1-201ENST00000620490 1937 ntBASIC5.01□□□□□ -1.61
RAB43Q86YS6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAB43Q86YS6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RAB43Q86YS6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAB43Q86YS6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RAB43Q86YS6 AC000374.1-201ENST00000434698 1745 ntBASIC5□□□□□ -1.61
RAB43Q86YS6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5□□□□□ -1.61
RAB43Q86YS6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RAB43Q86YS6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5□□□□□ -1.61
RAB43Q86YS6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
RAB43Q86YS6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAB43Q86YS6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5□□□□□ -1.61
RAB43Q86YS6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAB43Q86YS6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5□□□□□ -1.61
RAB43Q86YS6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5□□□□□ -1.61
RAB43Q86YS6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5□□□□□ -1.61
RAB43Q86YS6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms