Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RNU6-538P-201ENST00000622329 107 ntBASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 AC099494.2-201ENST00000623371 978 ntBASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 PCAT14-202ENST00000627127 3935 ntBASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3F3CQ6NXT2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 TCP1P3-201ENST00000414406 1498 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC092747.4-201ENST00000620519 1861 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 U3.3-201ENST00000362986 216 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 SNORA70.6-201ENST00000383934 134 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 U3.28-201ENST00000391249 210 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC106901.1-201ENST00000425086 698 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 RPS27P18-201ENST00000431701 247 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 CBX1P5-201ENST00000475330 559 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 USP9YP2-201ENST00000504503 1000 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 GTF2F2P1-201ENST00000511083 675 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 USP9YP1-201ENST00000513521 1002 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 RNU6-513P-201ENST00000516104 104 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AP001804.2-201ENST00000533932 910 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 BNIP3P32-201ENST00000600015 554 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC119501.1-201ENST00000603646 475 ntBASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3CQ6NXT2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AL353796.1-201ENST00000561542 3241 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC114947.2-201ENST00000565748 2125 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 MIR1182-201ENST00000408363 97 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 RN7SKP125-201ENST00000410481 302 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC211486.3-201ENST00000412694 621 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC006455.6-201ENST00000426192 893 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 NPM1P22-201ENST00000427761 952 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 VN1R54P-201ENST00000435210 1049 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 TCEA1P3-201ENST00000443005 880 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 DNAJB5P1-201ENST00000454004 806 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC009127.1-201ENST00000467090 155 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC090114.3-201ENST00000479267 829 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 RN7SL826P-201ENST00000479724 288 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AP002981.1-201ENST00000517692 975 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC009027.1-201ENST00000604510 479 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC009597.2-201ENST00000604659 592 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms